RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 TOR2AQ5JU69 321 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 HENMT1Q5T8I9 393 aaKnown RBP9.7□□□□□ -0.86
CHFR-219ENST00000541341 GARNL3Q5VVW2 1013 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 GPR139Q6DWJ6 353 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 TMEM64Q6YI46 380 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 TRILQ7L0X0 811 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 DPPA4Q7L190 304 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 KRT74Q7RTS7 529 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 COMMD6Q7Z4G1 85 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 OAFQ86UD1 273 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 CMIPQ8IY22 773 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 OR8H3Q8N146 312 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 RAB42Q8N4Z0 105 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 GPR26Q8NDV2 337 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 SRFBP1Q8NEF9 429 aaKnown RBP9.7□□□□□ -0.86
CHFR-219ENST00000541341 OR5T2Q8NGG2 359 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 OR52P1PQ8NH57 321 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 SLC7A13Q8TCU3 470 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 SFXN5Q8TD22 340 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 APOBEC4Q8WW27 367 aaKnown RBP9.7□□□□□ -0.86
CHFR-219ENST00000541341 TM9SF4Q92544 642 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 DPYSL5Q9BPU6 564 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 THAP7Q9BT49 309 aaPredicted RBP9.7□□□□□ -0.86
CHFR-219ENST00000541341 FAIM2Q9BWQ8 316 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 PINK1Q9BXM7 581 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 GSX2Q9BZM3 304 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 ABCG5Q9H222 651 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 OR51J1Q9H342 316 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 GPN1Q9HCN4 374 aaPredicted RBP9.7□□□□□ -0.86
CHFR-219ENST00000541341 TRIM36Q9NQ86 728 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 DMRT3Q9NQL9 472 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 WDR70Q9NW82 654 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 TSR3Q9UJK0 312 aaKnown RBP9.7□□□□□ -0.86
CHFR-219ENST00000541341 MGAT4AQ9UM21 535 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 MAP4K5Q9Y4K4 846 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 KALRNO60229 2985 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 SETXQ7Z333 2677 aaKnown RBP9.69□□□□□ -0.86
CHFR-219ENST00000541341 A0A0U1RQS6 177 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 C17orf113A0A1B0GUU1 675 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 LINC00854A0A1B0GVQ3 168 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 A0A1W2PRG6 482 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 A8MV72 311 aaPredicted RBP9.69□□□□□ -0.86
CHFR-219ENST00000541341 E7EQ34 232 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 I3L521 148 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 PGRMC2O15173 223 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 RRP8O43159 456 aaKnown RBP9.69□□□□□ -0.86
CHFR-219ENST00000541341 TSPAN6O43657 245 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 SULT1B1O43704 296 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 CHP2O43745 196 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 RNGTTO60942 597 aaKnown RBP9.69□□□□□ -0.86
CHFR-219ENST00000541341 UBL3O95164 117 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 PAHP00439 452 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 IGHA1P01876 353 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 OPN1SWP03999 348 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 ZNF8P17098 575 aaPredicted RBP9.69□□□□□ -0.86
CHFR-219ENST00000541341 MAPK3P27361 379 aaPredicted RBP9.69□□□□□ -0.86
CHFR-219ENST00000541341 HTR1FP30939 366 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 VIPR1P32241 457 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 SLC1A3P43003 542 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 ETV1P50549 477 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 CCR5P51681 352 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 CLDN2P57739 230 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 RPS7P62081 194 aaKnown RBP9.69□□□□□ -0.86
CHFR-219ENST00000541341 RPS13P62277 151 aaKnown RBP9.69□□□□□ -0.86
CHFR-219ENST00000541341 ACTC1P68032 377 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 ACTA1P68133 377 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 GALEQ14376 348 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 GANABQ14697 944 aaKnown RBP9.69□□□□□ -0.86
CHFR-219ENST00000541341 ARHGAP19Q14CB8 494 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 TSC22D1Q15714 1073 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 NTRK2Q16620 822 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 ATP13A5Q4VNC0 1218 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 PLA1AQ53H76 456 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 ZMAT1Q5H9K5 638 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 METTL11BQ5VVY1 283 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 TENM4Q6N022 2769 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 KIAA1161Q6NSJ0 714 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 TCTN3Q6NUS6 607 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 BTN2A1Q7KYR7 527 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 C16orf62Q7Z3J2 963 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 GALNT10Q86SR1 603 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 TOMM5Q8N4H5 51 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 TBC1D19Q8N5T2 526 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 SYT14Q8NB59 555 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 UXS1Q8NBZ7 420 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 TTLQ8NG68 377 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 SUN3Q8TAQ9 357 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 PIGXQ8TBF5 258 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 SLC2A12Q8TD20 617 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 MED8Q96G25 268 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 LRFN5Q96NI6 719 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 PKP4Q99569 1192 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 PELOQ9BRX2 385 aaKnown RBP9.69□□□□□ -0.86
CHFR-219ENST00000541341 FUZQ9BT04 418 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 IFT27Q9BW83 186 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 SGPP1Q9BX95 441 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 ATG10Q9H0Y0 220 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 PRORYQ9H606 182 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 PELI2Q9HAT8 420 aa9.69□□□□□ -0.86
CHFR-219ENST00000541341 TMEM184CQ9NVA4 438 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms