RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 BRD7Q9NPI1 651 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 WASH6PQ9NQA3 447 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRDM7Q9NQW5 492 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ELF5Q9UKW6 265 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 NUPL2O15504 423 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 PDGFAP04085 211 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 CISD3P0C7P0 127 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 P2RY2P41231 377 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 CDK3Q00526 305 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 OC90Q02509 493 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 CRMP1Q14194 572 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 PUS10Q3MIT2 529 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 OTPQ5XKR4 325 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 FRRS1Q6ZNA5 592 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 TOMM5Q8N4H5 51 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 ABHD4Q8TB40 342 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 GHSRQ92847 366 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 OSTF1Q92882 214 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZMYND19Q96E35 227 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 SCMH1Q96GD3 660 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 GPR137Q96N19 417 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 RBCK1Q9BYM8 510 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 METTL17Q9H7H0 456 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 BCL2L10Q9HD36 194 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 A0A0G2JPF8 293 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 FAM171A2A8MVW0 826 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 HNRNPCL2B2RXH8 293 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 HNRNPCL3B7ZW38 293 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 PPP1R3DO95685 299 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 RAF1P04049 648 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 HNRNPCL4P0DMR1 293 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 SAGP10523 405 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 FPR3P25089 353 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 PKLRP30613 574 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 ACSL1P33121 698 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 KRT33BQ14525 404 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 DUSP5Q16690 384 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 ACSM3Q53FZ2 586 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 TRMT12Q53H54 448 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 ARHGAP15Q53QZ3 475 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 TJAP1Q5JTD0 557 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 LRRC28Q86X40 367 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 NRSN1Q8IZ57 195 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR2T4Q8NH00 348 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 ADAMTS15Q8TE58 950 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 DDOQ99489 341 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 MS4A7Q9GZW8 240 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 PIGUQ9H490 435 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 ADAP2Q9NPF8 381 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRKAG2Q9UGJ0 569 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 KCNE5Q9UJ90 142 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 EXOGQ9Y2C4 368 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 MPDZO75970 2070 aa9.62□□□□□ -0.87
CDC42SE1-207ENST00000540998 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 J3QRE1 110 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF593O00488 134 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 GPR171O14626 319 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 KLF4O43474 513 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 SLC19A2O60779 497 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ADH5P11766 374 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 F3P13726 295 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 HK1P19367 917 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 MAT2AP31153 395 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ABHD17CQ6PCB6 329 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZAR1Q86SH2 424 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR2T35Q8NGX2 323 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR52N1Q8NH53 320 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ANGPTL6Q8NI99 470 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 CXorf40AQ8TE69 158 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNRF4Q8WWF5 429 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 DNAJA3Q96EY1 480 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 GIMAP5Q96F15 307 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 RBP7Q96R05 134 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR14A2Q96R54 314 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 SEC22CQ9BRL7 303 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 SPATA5L1Q9BVQ7 753 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 SEMA4CQ9C0C4 833 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR10A4Q9H209 315 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 EPHX3Q9H6B9 360 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 CREBZFQ9NS37 354 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ING4Q9UNL4 249 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 POLHQ9Y253 713 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF443Q9Y2A4 671 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 RPS10-NUDT3A0A1W2PQS6 291 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 G3V3Q6 166 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ANXA3P12429 323 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 PEBP1P30086 187 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF136P52737 540 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF85Q03923 595 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRDX1Q06830 199 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 RGS1Q08116 209 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF234Q14588 700 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 HES5Q5TA89 166 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 METRNLQ641Q3 311 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 TMEM65Q6PI78 240 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 METAP1DQ6UB28 335 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 MBOAT2Q6ZWT7 520 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 ANKRD33Q7Z3H0 272 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRSS27Q9BQR3 290 aa9.61□□□□□ -0.87
CDC42SE1-207ENST00000540998 SPRTNQ9H040 489 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms