RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 A0A1W2PPB8 328 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 A0A1W2PRS3 328 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 KIR3DP1A8MWS1 328 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 NPIPA5E9PKD4 350 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 M0QX08 132 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 AQP7O14520 342 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 BCKDKO14874 412 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 C1QCP02747 245 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 LINGO3P0C6S8 592 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 HOXB6P17509 224 aaKnown RBP15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 KDELR2P33947 212 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 CPOXP36551 454 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 GSK3BP49841 420 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 CASP6P55212 293 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 ZNF117Q03924 483 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 MAPK14Q16539 360 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 MTX3Q5HYI7 312 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 NHSL2Q5HYW2 709 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 MRPL2Q5T653 305 aaKnown RBP15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 TMCO5AQ8N6Q1 288 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 OR14L1PQ8NHC6 308 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 NEIL3Q8TAT5 605 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 PROX1Q92786 737 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 MRGPRX4Q96LA9 322 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 BTBD10Q9BSF8 475 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 EXO5Q9H790 373 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 TAS2R10Q9NYW0 307 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 TAS2R1Q9NYW7 299 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 MED11Q9P086 117 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 KCNE5Q9UJ90 142 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 RPS6KA6Q9UK32 745 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 NPIPA1Q9UND3 350 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 SLC9A8Q9Y2E8 581 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 CARD8Q9Y2G2 431 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 NINQ8N4C6 2090 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 BSNQ9UPA5 3926 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 NPIPA5A0A0B4J1W7 369 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 PINLYPA6NC86 204 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 CFAP73A6NFT4 308 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 FAM166BA8MTA8 275 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 NPIPA7E9PJI5 369 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 MFN2O95140 757 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 HOXD4P09016 255 aaPredicted RBP15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 UBTFL6P0CB48 400 aaPredicted RBP15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 NPIPA8P0DM63 369 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 ELK4P28324 431 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 EEF1A1P68104 462 aaKnown RBP15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 GABPB1Q06547 395 aaPredicted RBP15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 SKP2Q13309 424 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 CD226Q15762 336 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 CMPK2Q5EBM0 449 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 RPS26P11Q5JNZ5 115 aaPredicted RBP15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 LURAP1LQ8IV03 231 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 PM20D2Q8IYS1 436 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 C10orf111Q8N326 155 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 FAM83FQ8NEG4 500 aaPredicted RBP15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 OR52E4Q8NGH9 312 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 ZG16BQ96DA0 208 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 GORASP2Q9H8Y8 452 aa15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 SPIN1Q9Y657 262 aaPredicted RBP15.92■□□□□ 0.14
CLSTN3-210ENST00000540931 LRRK2Q5S007 2527 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 C2orf72A6NCS6 295 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 GJE1A6NN92 205 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 CXCR6O00574 342 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 FMO6PO60774 539 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 CYP7B1O75881 506 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 HK1P19367 917 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 ME2P23368 584 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 IFNA8P32881 189 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 PTGER4P35408 488 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 CCR4P51679 360 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 NCALDP61601 193 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 PMP22Q01453 160 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 BCL2A1Q16548 175 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 FXNQ16595 210 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 OR5M10Q6IEU7 315 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 GFRALQ6UXV0 394 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 ZNF836Q6ZNA1 936 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 TRILQ7L0X0 811 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 RANBP3LQ86VV4 465 aaPredicted RBP15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 GATSQ8NAP1 163 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 ZNF563Q8TA94 476 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 GPR119Q8TDV5 335 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 SH3YL1Q96HL8 342 aaPredicted RBP15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 TRIM8Q9BZR9 551 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 POLR2J2Q9GZM3 115 aaKnown RBP15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 QRSL1Q9H0R6 528 aaKnown RBP15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 POLR2J3Q9H1A7 115 aaKnown RBP15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 PIF1Q9H611 641 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 SERINC1Q9NRX5 453 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 DNAJB12Q9NXW2 375 aaKnown RBP15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 CD300AQ9UGN4 299 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 FBXL2Q9UKC9 423 aa15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 SAMD4AQ9UPU9 718 aaKnown RBP15.91■□□□□ 0.14
CLSTN3-210ENST00000540931 EML6Q6ZMW3 1958 aa15.9■□□□□ 0.14
CLSTN3-210ENST00000540931 ETV2O00321 342 aaPredicted RBP15.9■□□□□ 0.14
CLSTN3-210ENST00000540931 ADAM10O14672 748 aa15.9■□□□□ 0.14
CLSTN3-210ENST00000540931 DNAJC8O75937 253 aaPredicted RBP15.9■□□□□ 0.14
CLSTN3-210ENST00000540931 RFPL3SP0C7P2 107 aa15.9■□□□□ 0.14
CLSTN3-210ENST00000540931 PEPDP12955 493 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms