RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 OR4A15Q8NGL6 344 aa18.78■□□□□ 0.6
CHFR-217ENST00000540537 MIPOL1Q8TD10 442 aa18.78■□□□□ 0.6
CHFR-217ENST00000540537 GPR119Q8TDV5 335 aa18.78■□□□□ 0.6
CHFR-217ENST00000540537 WFIKKN1Q96NZ8 548 aa18.78■□□□□ 0.6
CHFR-217ENST00000540537 PLSCR4Q9NRQ2 329 aa18.78■□□□□ 0.6
CHFR-217ENST00000540537 ZNF226Q9NYT6 803 aa18.78■□□□□ 0.6
CHFR-217ENST00000540537 ZNF469Q96JG9 3925 aaPredicted RBP18.78■□□□□ 0.6
CHFR-217ENST00000540537 PRSS51A0A1B0GVH4 220 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 ESPNB1AK53 854 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 ANKRD28O15084 1053 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 EIF4E2O60573 245 aaKnown RBP18.77■□□□□ 0.6
CHFR-217ENST00000540537 NUDT14O95848 222 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 IL11P20809 199 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 RNF144AP50876 292 aaPredicted RBP18.77■□□□□ 0.6
CHFR-217ENST00000540537 CLNS1AP54105 237 aaKnown RBP18.77■□□□□ 0.6
CHFR-217ENST00000540537 CTBP2P56545 445 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 KEAP1Q14145 624 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 DPY19L1Q2PZI1 675 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 OGFOD2Q6N063 350 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 LILRA2Q8N149 483 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 FBXO27Q8NI29 283 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 OSTF1Q92882 214 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 PAIP2Q9BPZ3 127 aaKnown RBP18.77■□□□□ 0.6
CHFR-217ENST00000540537 MED18Q9BUE0 208 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 PNPOQ9NVS9 261 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 KLHL28Q9NXS3 571 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 CLEC4AQ9UMR7 237 aa18.77■□□□□ 0.6
CHFR-217ENST00000540537 UQCRHLA0A096LP55 91 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 A0A1W2PPR1 153 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 GJE1A6NN92 205 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 ZNF195O14628 629 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 ZNF264O43296 627 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 STX11O75558 287 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 AGR2O95994 175 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 UBL4AP11441 157 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 PRKCAP17252 672 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 UQCRC2P22695 453 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 CRYGSP22914 178 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 SHC1P29353 583 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 SFTPDP35247 375 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 CARD18P57730 90 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 PHC1P78364 1004 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 ZNF141Q15928 474 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 ARHGAP11BQ3KRB8 267 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 PDZK1Q5T2W1 519 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 HHATQ5VTY9 493 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 GTF2IRD2BQ6EKJ0 949 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 GTF2IRD2Q86UP8 949 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 TGIF2LYQ8IUE0 185 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 CLEC4FQ8N1N0 589 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 TOR1AIP2Q8NFQ8 470 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 OR5W2Q8NH69 310 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 ARSGQ96EG1 525 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 MRGPRX4Q96LA9 322 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 TMUB1Q9BVT8 246 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 ZNF350Q9GZX5 532 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 TIGARQ9NQ88 270 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 EXD2Q9NVH0 621 aa18.76■□□□□ 0.59
CHFR-217ENST00000540537 SERINC4A6NH21 518 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 DEFB108AA8MXU0 73 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 ETV2O00321 342 aaPredicted RBP18.75■□□□□ 0.59
CHFR-217ENST00000540537 EFNA2O43921 213 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 NTN1O95631 604 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 GUSBP08236 651 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 PABPC4LP0CB38 370 aaKnown RBP18.75■□□□□ 0.59
CHFR-217ENST00000540537 CASP8Q14790 479 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 GPR68Q15743 365 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 TOMM34Q15785 309 aaPredicted RBP18.75■□□□□ 0.59
CHFR-217ENST00000540537 ZNF239Q16600 458 aaKnown RBP18.75■□□□□ 0.59
CHFR-217ENST00000540537 DEFB113Q30KQ7 82 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 NDUFAF6Q330K2 333 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 SLC25A53Q5H9E4 307 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 HEPHL1Q6MZM0 1159 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 ANKRD46Q86W74 232 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 ANKRD42Q8N9B4 389 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 CPNE4Q96A23 557 aaPredicted RBP18.75■□□□□ 0.59
CHFR-217ENST00000540537 ZBTB9Q96C00 473 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 OR51I1Q9H343 314 aa18.75■□□□□ 0.59
CHFR-217ENST00000540537 SETD2Q9BYW2 2564 aaPredicted RBP18.75■□□□□ 0.59
CHFR-217ENST00000540537 E9PBE3 544 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 SIAH2O43255 324 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 CPSF4O95639 269 aaKnown RBP18.74■□□□□ 0.59
CHFR-217ENST00000540537 CD99P14209 185 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 NID1P14543 1247 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 WDR4P57081 412 aaKnown RBP18.74■□□□□ 0.59
CHFR-217ENST00000540537 SELENBP1Q13228 472 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 CBFBQ13951 182 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 SPANXN4Q5MJ08 99 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 SAXO2Q658L1 398 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 C16orf62Q7Z3J2 963 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 TMCO5AQ8N6Q1 288 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 RNF128Q8TEB7 428 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 OIT3Q8WWZ8 545 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 NEURL3Q96EH8 262 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 REXO5Q96IC2 774 aaKnown RBP18.74■□□□□ 0.59
CHFR-217ENST00000540537 LAT2Q9GZY6 243 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 FANCFQ9NPI8 374 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 POLE3Q9NRF9 147 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 THAP1Q9NVV9 213 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 C6orf203Q9P0P8 240 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms