RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 TEAD3Q99594 435 aa11.54□□□□□ -0.56
NEK6-213ENST00000540326 JAM3Q9BX67 310 aa11.54□□□□□ -0.56
NEK6-213ENST00000540326 SLC28A3Q9HAS3 691 aa11.54□□□□□ -0.56
NEK6-213ENST00000540326 CAPN10Q9HC96 672 aa11.54□□□□□ -0.56
NEK6-213ENST00000540326 ZNF223Q9UK11 482 aaPredicted RBP11.54□□□□□ -0.56
NEK6-213ENST00000540326 COLEC10Q9Y6Z7 277 aa11.54□□□□□ -0.56
NEK6-213ENST00000540326 TBC1D3DA0A087WVF3 549 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 TBC1D3IA0A087WXS9 549 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 TBC1D3EA0A087X179 549 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 POM121BA6NF01 834 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 LRRC72A6NJI9 287 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 TBC1D3LB9A6J9 549 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 J3QLW9 94 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 ERVH48-1M5A8F1 160 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 CTSVO60911 334 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 ZNF780AO75290 641 aaPredicted RBP11.53□□□□□ -0.56
NEK6-213ENST00000540326 C1QBP02746 253 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 TBC1D3HP0C7X1 549 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 ZNF19P17023 458 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 TALDO1P37837 337 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 SRP9P49458 86 aaKnown RBP11.53□□□□□ -0.56
NEK6-213ENST00000540326 RPS15AP62244 130 aaKnown RBP11.53□□□□□ -0.56
NEK6-213ENST00000540326 FOXK2Q01167 660 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 GALEQ14376 348 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 TMEM240Q5SV17 173 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 TIGD3Q6B0B8 471 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 TBC1D3CQ6IPX1 549 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 KRT74Q7RTS7 529 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 CEACAM19Q7Z692 300 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 TBC1D3Q8IZP1 549 aaPredicted RBP11.53□□□□□ -0.56
NEK6-213ENST00000540326 C7orf57Q8NEG2 295 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 DEDD2Q8WXF8 326 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 ACOT12Q8WYK0 555 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 BPIFA2Q96DR5 249 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 PLA2G2FQ9BZM2 168 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 ABCG5Q9H222 651 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 CYSLTR2Q9NS75 346 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 OR6C2Q9NZP2 312 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 CA5BQ9Y2D0 317 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 A0A1W2PPK0 400 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 PRR23D1E9PI22 279 aaPredicted RBP11.53□□□□□ -0.56
NEK6-213ENST00000540326 EEF1E1O43324 174 aaKnown RBP11.53□□□□□ -0.56
NEK6-213ENST00000540326 AGR2O95994 175 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 PRR23D2P0DMB1 279 aaPredicted RBP11.53□□□□□ -0.56
NEK6-213ENST00000540326 LAMP2P13473 410 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 IL9P15248 144 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 THBS2P35442 1172 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 OR12D2P58182 307 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 BDH1Q02338 343 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 CCDC58Q4VC31 144 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 EIPR1Q53HC9 387 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 DCST2Q5T1A1 773 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 SFXN4Q6P4A7 337 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 PRSS41Q7RTY9 318 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 LRRC28Q86X40 367 aaPredicted RBP11.53□□□□□ -0.56
NEK6-213ENST00000540326 GHDCQ8N2G8 530 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 LNX2Q8N448 690 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 TOR1AIP2Q8NFQ8 470 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 GRHL3Q8TE85 626 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 SNAPC3Q92966 411 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 C4orf36Q96KX1 117 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 GON7Q9BXV9 100 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 SRMSQ9H3Y6 488 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 KIR3DX1Q9H7L2 352 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 NTMQ9P121 344 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 USP36Q9P275 1121 aaKnown RBP11.53□□□□□ -0.56
NEK6-213ENST00000540326 ZMIZ1Q9ULJ6 1067 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 DAPP1Q9UN19 280 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 HSPB11Q9Y547 144 aa11.53□□□□□ -0.56
NEK6-213ENST00000540326 TRAV6A0A075B6T7 132 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 LOC105369274A0A096LPK9 316 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 PRSS38A1L453 326 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 H0Y8X5 98 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 STX11O75558 287 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 RFPL3O75679 317 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 CPMP14384 443 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 SDHBP21912 280 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 GALP22466 123 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 F8A1P23610 371 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 SLC6A1P30531 599 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 EXOSC7Q15024 291 aaKnown RBP11.52□□□□□ -0.56
NEK6-213ENST00000540326 SLC25A35Q3KQZ1 300 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 RNASE12Q5GAN4 147 aaKnown RBP11.52□□□□□ -0.56
NEK6-213ENST00000540326 BCL2L15Q5TBC7 163 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 SYT9Q86SS6 491 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 GPR135Q8IZ08 494 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 OR4N4Q8N0Y3 316 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 OR13C5Q8NGS8 318 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 AKAP1Q92667 903 aaKnown RBP eCLIP11.52□□□□□ -0.565e-9■■■■■ 28.2
NEK6-213ENST00000540326 RFT1Q96AA3 541 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 CREB3L1Q96BA8 519 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 ABHD1Q96SE0 405 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 NDC1Q9BTX1 674 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 ZNF350Q9GZX5 532 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 CERS4Q9HA82 394 aa11.52□□□□□ -0.56
NEK6-213ENST00000540326 ZNF624Q9P2J8 865 aaPredicted RBP11.52□□□□□ -0.56
NEK6-213ENST00000540326 MRPS2Q9Y399 296 aaKnown RBP11.52□□□□□ -0.56
NEK6-213ENST00000540326 MYO15AQ9UKN7 3530 aa11.52□□□□□ -0.57
NEK6-213ENST00000540326 CDHR4A6H8M9 788 aa11.52□□□□□ -0.57
NEK6-213ENST00000540326 FAM86C2PA6NEL3 165 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms