RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 TMEM201Q5SNT2 666 aa10.41□□□□□ -0.74
PBX1-212ENST00000540236 KLHL24Q6TFL4 600 aa10.41□□□□□ -0.74
PBX1-212ENST00000540236 WDR53Q7Z5U6 358 aaPredicted RBP10.41□□□□□ -0.74
PBX1-212ENST00000540236 GLB1L2Q8IW92 636 aa10.41□□□□□ -0.74
PBX1-212ENST00000540236 MYLIPQ8WY64 445 aa10.41□□□□□ -0.74
PBX1-212ENST00000540236 ABCC13Q9NSE7 274 aa10.41□□□□□ -0.74
PBX1-212ENST00000540236 PARPBPQ9NWS1 579 aa10.41□□□□□ -0.74
PBX1-212ENST00000540236 CNOT2Q9NZN8 540 aaKnown RBP10.41□□□□□ -0.74
PBX1-212ENST00000540236 PGAP2Q9UHJ9 254 aa10.41□□□□□ -0.74
PBX1-212ENST00000540236 PPT2Q9UMR5 302 aa10.41□□□□□ -0.74
PBX1-212ENST00000540236 A0A0D9SEW6 157 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 TRBV2A0A0J9YWF9 115 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 HNF1AP20823 631 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 CCR4P51679 360 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 DEFB115Q30KQ5 88 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 FRG2Q64ET8 278 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 C8orf82Q6P1X6 216 aaPredicted RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 AMDHD1Q96NU7 426 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 FRG2BQ96QU4 278 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 ATOH8Q96SQ7 321 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 NXF2Q9GZY0 626 aaKnown RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 C8orf33Q9H7E9 229 aaPredicted RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 OR1G1P47890 313 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 F2RL1P55085 397 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 RGS8P57771 180 aaPredicted RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 ETV3LQ6ZN32 361 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 CPOQ8IVL8 374 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 THAP3Q8WTV1 239 aaPredicted RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 ARSGQ96EG1 525 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 CMTM7Q96FZ5 175 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 TREX1Q9NSU2 369 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 SMIM6P0DI80 62 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 CPEP16870 476 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 ITPKBP27987 946 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 SQSTM1Q13501 440 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 IRF4Q15306 451 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.4□□□□□ -0.74
PBX1-212ENST00000540236 PSRC1Q6PGN9 363 aaPredicted RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 AMIGO3Q86WK7 504 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 BBS1Q8NFJ9 593 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 OR5M3Q8NGP4 307 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 MSLNLQ96KJ4 702 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 RTP3Q9BQQ7 232 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 ELL3Q9HB65 397 aaPredicted RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 HRASLSQ9HDD0 168 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 ELOVL2Q9NXB9 296 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 DNAJB11Q9UBS4 358 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 HS3ST4Q9Y661 456 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 MYO10Q9HD67 2058 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 THP07101 528 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 ACAA1P09110 424 aaPredicted RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 SELLP14151 372 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 CACNG1Q06432 222 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 GLYR1Q49A26 553 aaPredicted RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 RGS7BPQ6MZT1 257 aaPredicted RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 PGAP1Q75T13 922 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 KDM8Q8N371 416 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 NECAP1Q8NC96 275 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 KIAA1143Q96AT1 154 aaPredicted RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 RAB3CQ96E17 227 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 RRNAD1Q96FB5 475 aaKnown RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 MARVELD1Q9BSK0 173 aa10.4□□□□□ -0.74
PBX1-212ENST00000540236 ZMAT3Q9HA38 289 aaKnown RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 USP36Q9P275 1121 aaKnown RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 LSM5Q9Y4Y9 91 aaKnown RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 ZFP37Q9Y6Q3 630 aaPredicted RBP10.4□□□□□ -0.74
PBX1-212ENST00000540236 EFCAB7A8K855 629 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 TARM1B6A8C7 271 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 ARNTLO00327 626 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 OR2C1O95371 312 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 HIST1H2ABP04908 130 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 SNRPCP09234 159 aaKnown RBP10.4□□□□□ -0.75
PBX1-212ENST00000540236 PCSK1P29120 753 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 FNDC3BQ53EP0 1204 aaKnown RBP10.4□□□□□ -0.75
PBX1-212ENST00000540236 Q5PR19 223 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 PODNL1Q6PEZ8 512 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 HIST3H2AQ7L7L0 130 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 OR2W3Q7Z3T1 314 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 RNF180Q86T96 592 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 PUSL1Q8N0Z8 303 aaKnown RBP10.4□□□□□ -0.75
PBX1-212ENST00000540236 ARL14Q8N4G2 192 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 HIST1H2ACQ93077 130 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 SAMD8Q96LT4 415 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 SPACA1Q9HBV2 294 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 ADAM18Q9Y3Q7 739 aa10.4□□□□□ -0.75
PBX1-212ENST00000540236 TIMM8BQ9Y5J9 83 aaPredicted RBP10.4□□□□□ -0.75
PBX1-212ENST00000540236 CCDC163A0A0D9SF12 145 aa10.39□□□□□ -0.75
PBX1-212ENST00000540236 SLC34A2O95436 690 aa10.39□□□□□ -0.75
PBX1-212ENST00000540236 TPT1P13693 172 aaKnown RBP10.39□□□□□ -0.75
PBX1-212ENST00000540236 RBP2P50120 134 aa10.39□□□□□ -0.75
PBX1-212ENST00000540236 OR8G1Q15617 311 aa10.39□□□□□ -0.75
PBX1-212ENST00000540236 GDPGP1Q6ZNW5 385 aa10.39□□□□□ -0.75
PBX1-212ENST00000540236 OR1S1Q8NH92 325 aa10.39□□□□□ -0.75
PBX1-212ENST00000540236 KLK6Q92876 244 aa10.39□□□□□ -0.75
PBX1-212ENST00000540236 OR51M1Q9H341 326 aa10.39□□□□□ -0.75
PBX1-212ENST00000540236 ANKRD66B4E2M5 251 aa10.39□□□□□ -0.75
PBX1-212ENST00000540236 STBD1O95210 358 aa10.39□□□□□ -0.75
PBX1-212ENST00000540236 CPN1P15169 458 aa10.39□□□□□ -0.75
PBX1-212ENST00000540236 PCSK2P16519 638 aa10.39□□□□□ -0.75
PBX1-212ENST00000540236 DCTDP32321 178 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms