RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 PRRG3Q9BZD7 231 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 TP63Q9H3D4 680 aaPredicted RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 ANKRD19PQ9H560 264 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 TRPV5Q9NQA5 729 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 PTGFRNQ9P2B2 879 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 CPNE7Q9UBL6 633 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 ZNF223Q9UK11 482 aaPredicted RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 MMP17Q9ULZ9 603 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 EXOGQ9Y2C4 368 aaKnown RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 IRGMA1A4Y4 181 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 C2CD4DB7Z1M9 353 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 MAGEB4O15481 346 aaPredicted RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 PLA2G10O15496 165 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 RDH16O75452 317 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 LYPD3O95274 346 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 SAGP10523 405 aaPredicted RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 HCCSP53701 268 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 SCN1BQ07699 218 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 ILF3Q12906 894 aaKnown RBP eCLIP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 EIF2B5Q13144 721 aaKnown RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 CCINQ13939 588 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 ERV3-1Q14264 604 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 NNATQ16517 81 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 EOGTQ5NDL2 527 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 ZNF362Q5T0B9 420 aaPredicted RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 XKRXQ6PP77 449 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 NR2C2APQ86WQ0 139 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 GHDCQ8N2G8 530 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 CAMKVQ8NCB2 501 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 OR10H4Q8NGA5 316 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 OR6F1Q8NGZ6 308 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 GPBAR1Q8TDU6 330 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 CNOT9Q92600 299 aaKnown RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 TIMP4Q99727 224 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 IFT27Q9BW83 186 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 RNF32Q9H0A6 362 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 PPIL3Q9H2H8 161 aaKnown RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 C8orf33Q9H7E9 229 aaPredicted RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 FAM60AQ9NP50 221 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 B3GAT2Q9NPZ5 323 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 MEPEQ9NQ76 525 aaPredicted RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 DDX28Q9NUL7 540 aaKnown RBP10.67□□□□□ -0.7
C11orf54-214ENST00000540113 BOLA1Q9Y3E2 137 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 SLCO1B1Q9Y6L6 691 aa10.67□□□□□ -0.7
C11orf54-214ENST00000540113 TRDV1A0A1B0GX56 115 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 MEIOCA2RUB1 952 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 CYR61O00622 381 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 IGHA1P01876 353 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 EMDP50402 254 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 MGAT2Q10469 447 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 PRICKLE4Q2TBC4 344 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 NIPAL3Q6P499 406 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 CD200R1LQ6Q8B3 271 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 RPTNQ6XPR3 784 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 SLC44A3Q8N4M1 653 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 OR9A4Q8NGU2 314 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 BAHD1Q8TBE0 780 aaPredicted RBP10.66□□□□□ -0.7
C11orf54-214ENST00000540113 SLC37A2Q8TED4 501 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 NR4A3Q92570 626 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 PTP4A1Q93096 173 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 ZNF486Q96H40 463 aaPredicted RBP10.66□□□□□ -0.7
C11orf54-214ENST00000540113 HS6ST2Q96MM7 605 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 CD180Q99467 661 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 ALG8Q9BVK2 526 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 TEX12Q9BXU0 123 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 IL21RQ9HBE5 538 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 ZNF221Q9UK13 617 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 N6AMT1Q9Y5N5 214 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 HS3ST3A1Q9Y663 406 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 LAMA1P25391 3075 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 A0A0B4J293 547 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 CDHR4A6H8M9 788 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 BHLHE40O14503 412 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 AKAP8O43823 692 aaKnown RBP10.66□□□□□ -0.7
C11orf54-214ENST00000540113 KRT8P05787 483 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 NID1P14543 1247 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 PAICSP22234 425 aaKnown RBP10.66□□□□□ -0.7
C11orf54-214ENST00000540113 TCEA1P23193 301 aaKnown RBP10.66□□□□□ -0.7
C11orf54-214ENST00000540113 FGF9P31371 208 aaPredicted RBP10.66□□□□□ -0.7
C11orf54-214ENST00000540113 KIR2DL3P43628 341 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 CTBP2P56545 445 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 IL18Q14116 193 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 NDUFAF6Q330K2 333 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 EXOSC6Q5RKV6 272 aaKnown RBP10.66□□□□□ -0.7
C11orf54-214ENST00000540113 ZNF544Q6NX49 715 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 Q6ZS52 159 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 RNF44Q7L0R7 432 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 CA13Q8N1Q1 262 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 CSNK1A1LQ8N752 337 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 FAM181AQ8N9Y4 354 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 OR52R1Q8NGF1 315 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 RSC1A1Q92681 617 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 BPIFA2Q96DR5 249 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 RNF31Q96EP0 1072 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 MED18Q9BUE0 208 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 CCDC86Q9H6F5 360 aaKnown RBP10.66□□□□□ -0.7
C11orf54-214ENST00000540113 NUFIP1Q9UHK0 495 aaKnown RBP10.66□□□□□ -0.7
C11orf54-214ENST00000540113 CLCA3PQ9Y6N3 262 aa10.66□□□□□ -0.7
C11orf54-214ENST00000540113 TMEM265A0A087WTH1 108 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms