RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ZBTB8AQ96BR9 441 aa16.49■□□□□ 0.23
SNRPA1-203ENST00000540017 CHST11Q9NPF2 352 aa16.49■□□□□ 0.23
SNRPA1-203ENST00000540017 KCNJ16Q9NPI9 418 aa16.49■□□□□ 0.23
SNRPA1-203ENST00000540017 NPDC1Q9NQX5 325 aaPredicted RBP16.49■□□□□ 0.23
SNRPA1-203ENST00000540017 LIPT1Q9Y234 373 aa16.49■□□□□ 0.23
SNRPA1-203ENST00000540017 AP4B1Q9Y6B7 739 aa16.49■□□□□ 0.23
SNRPA1-203ENST00000540017 DOCK7Q96N67 2140 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 HSPB2A8KAH6 182 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 FAM47E-STBD1D6RA91 191 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 CLIC1O00299 241 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 EIF4E2O60573 245 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 NUDT14O95848 222 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 TGM6O95932 706 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 CSTAP01040 98 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 IL2RAP01589 272 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 SNRPB2P08579 225 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 NR2F1P10589 423 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 PGM1P36871 562 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 MDH1P40925 334 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 ANXA11P50995 505 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 AGFG1P52594 562 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 SUMO3P55854 103 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 FOXF1Q12946 379 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 FOXF2Q12947 444 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 RGNQ15493 299 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 HSPB2Q16082 182 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 LRRC74BQ6ZQY2 392 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 C10orf111Q8N326 155 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 MEIOBQ8N635 442 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 TMCO5AQ8N6Q1 288 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 RELL2Q8NC24 303 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 FAM71CQ8NEG0 241 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 OR5W2Q8NH69 310 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 WNT2BQ93097 391 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 LAT2Q9GZY6 243 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 VAPAQ9P0L0 249 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 TRIM33Q9UPN9 1127 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 HCFC1P51610 2035 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 HEATR5AQ86XA9 2040 aa16.48■□□□□ 0.23
SNRPA1-203ENST00000540017 UNC79Q9P2D8 2635 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 TRBV5-3A0A0A0MS03 114 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 A0A1W2PP18 115 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 DNAJA2O60884 412 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 CYP7B1O75881 506 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 NUDT7P0C024 238 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 TFPTP0C1Z6 253 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 UBTFL6P0CB48 400 aaPredicted RBP16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 TROVE2P10155 538 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 PRKCAP17252 672 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 SHC1P29353 583 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 MAGEA8P43361 318 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 CCR4P51679 360 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 DSTNP60981 165 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 HPCAP84074 193 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 CTU2Q2VPK5 515 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 METTL21CQ5VZV1 264 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 EIF3MQ7L2H7 374 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 ACBD4Q8NC06 268 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 FBXO27Q8NI29 283 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 SLC38A5Q8WUX1 472 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 FIG4Q92562 907 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 ZNF845Q96IR2 970 aaPredicted RBP16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 THUMPD3Q9BV44 507 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 RABEP2Q9H5N1 569 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 TMEM185BQ9H7F4 350 aa16.47■□□□□ 0.23
SNRPA1-203ENST00000540017 AGAP5A6NIR3 686 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 ADAM11O75078 769 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 NTN1O95631 604 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 BCHEP06276 602 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 PRF1P14222 555 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 BMP5P22003 454 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 RPS4Y1P22090 263 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 RAC1P63000 192 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 KCNJ10P78508 379 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 QPRTQ15274 297 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 RPS26P11Q5JNZ5 115 aaPredicted RBP16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 DLEU7Q6UYE1 221 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 RETREG3Q86VR2 466 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 GCNT2Q8N0V5 402 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 METTL25Q8N6Q8 603 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 TOR1AIP2Q8NFQ8 470 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 OIT3Q8WWZ8 545 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 CNOT9Q92600 299 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 MARVELD3Q96A59 401 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 INTS12Q96CB8 462 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 ADGRG7Q96K78 797 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 ZNF317Q96PQ6 595 aaPredicted RBP16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 PINK1Q9BXM7 581 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 ENKD1Q9H0I2 346 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 IKZF5Q9H5V7 419 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 MTHFD2LQ9H903 347 aaPredicted RBP16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 P2RX2Q9UBL9 471 aa16.46■□□□□ 0.23
SNRPA1-203ENST00000540017 MED12LQ86YW9 2145 aa16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 A0A0J9YW62 118 aa16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 EIF1AYO14602 144 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 RCBTB2O95199 551 aa16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 TMIGD3P0DMS9 266 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 IGFBP2P18065 325 aa16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 CTSSP25774 331 aa16.45■□□□□ 0.22
SNRPA1-203ENST00000540017 ARFIP2P53365 341 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms