RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 BTBD1Q9H0C5 482 aa7.14□□□□□ -1.27
CCDC60-204ENST00000539847 SLC6A17Q9H1V8 727 aa7.14□□□□□ -1.27
CCDC60-204ENST00000539847 DPAGT1Q9H3H5 408 aa7.14□□□□□ -1.27
CCDC60-204ENST00000539847 PRORYQ9H606 182 aa7.14□□□□□ -1.27
CCDC60-204ENST00000539847 CD93Q9NPY3 652 aa7.14□□□□□ -1.27
CCDC60-204ENST00000539847 SEMA3GQ9NS98 782 aa7.14□□□□□ -1.27
CCDC60-204ENST00000539847 NFKBIL1Q9UBC1 381 aaPredicted RBP7.14□□□□□ -1.27
CCDC60-204ENST00000539847 UBQLN2Q9UHD9 624 aa7.14□□□□□ -1.27
CCDC60-204ENST00000539847 SCP2D1Q9UJQ7 156 aa7.14□□□□□ -1.27
CCDC60-204ENST00000539847 EXO1Q9UQ84 846 aaKnown RBP7.14□□□□□ -1.27
CCDC60-204ENST00000539847 LIPT1Q9Y234 373 aa7.14□□□□□ -1.27
CCDC60-204ENST00000539847 SPIN1Q9Y657 262 aaPredicted RBP7.14□□□□□ -1.27
CCDC60-204ENST00000539847 COL5A1P20908 1838 aaPredicted RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 MYO18BQ8IUG5 2567 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 MEIKINA0A087WXM9 373 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 RPS10-NUDT3A0A1W2PQS6 291 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 ANKDD1BA6NHY2 528 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 C10orf142B7Z368 130 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 BTN3A3O00478 584 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 CASKO14936 926 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 RRP8O43159 456 aaKnown RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 AKAP8O43823 692 aaKnown RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 PRAF2O60831 178 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 WISP1O95388 367 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 SEMA4FO95754 770 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 FHP07954 510 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 CLEC2LP0C7M8 214 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 JMJD7P0C870 316 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 ATP1B2P14415 290 aaPredicted RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 CD22P20273 847 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 NPR2P20594 1047 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 ELAVL4P26378 380 aaKnown RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 POU1F1P28069 291 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 RBMS1P29558 406 aaKnown RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 CORO1AP31146 461 aaKnown RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 EIF2S3P41091 472 aaKnown RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 ETV5P41161 510 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 OR1E2P47887 323 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 ETV1P50549 477 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 GBX2P52951 348 aaPredicted RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 ARFIP1P53367 373 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 DSTNP60981 165 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 DHODHQ02127 395 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 ID3Q02535 119 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 CAMK2DQ13557 499 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 DYRK1AQ13627 763 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 DOC2BQ14184 412 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 GALEQ14376 348 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 GPR176Q14439 515 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 GINS1Q14691 196 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 MLC1Q15049 377 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 AANATQ16613 207 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 MPPE1Q53F39 396 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 EXOSC6Q5RKV6 272 aaKnown RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 GARNL3Q5VVW2 1013 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 PYHIN1Q6K0P9 492 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 MED27Q6P2C8 311 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 FAM83HQ6ZRV2 1179 aaPredicted RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 OAFQ86UD1 273 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 ZNF366Q8N895 744 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 POGLUT1Q8NBL1 392 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 TP53I13Q8NBR0 393 aaPredicted RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 C16orf78Q8WTQ4 265 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 UPRTQ96BW1 309 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 PPCDCQ96CD2 204 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 SLC38A2Q96QD8 506 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 SMIM14Q96QK8 99 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 PELOQ9BRX2 385 aaKnown RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 TEX12Q9BXU0 123 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 CPEB1Q9BZB8 566 aaKnown RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 ZNF700Q9H0M5 742 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 OR51J1Q9H342 316 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 ANKRD19PQ9H560 264 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 C6orf106Q9H6K1 298 aaPredicted RBP7.13□□□□□ -1.27
CCDC60-204ENST00000539847 IFT22Q9H7X7 185 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 ERVMER34-1Q9H9K5 563 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 BCL2L10Q9HD36 194 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 ZFP64Q9NPA5 681 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 C12orf4Q9NQ89 552 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 AHSPQ9NZD4 102 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 MAT2BQ9NZL9 334 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 DNAJC27Q9NZQ0 273 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 COMMD3Q9UBI1 195 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 MGAT4AQ9UM21 535 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 EMC9Q9Y3B6 208 aa7.13□□□□□ -1.27
CCDC60-204ENST00000539847 A0A0A6YYJ9 748 aa7.12□□□□□ -1.27
CCDC60-204ENST00000539847 TRBV4-1A0A0J9YWV2 114 aa7.12□□□□□ -1.27
CCDC60-204ENST00000539847 LINC00854A0A1B0GVQ3 168 aa7.12□□□□□ -1.27
CCDC60-204ENST00000539847 A0A1W2PPC4 97 aa7.12□□□□□ -1.27
CCDC60-204ENST00000539847 C5orf58C9J3I9 102 aa7.12□□□□□ -1.27
CCDC60-204ENST00000539847 KRBOX1C9JBD0 128 aa7.12□□□□□ -1.27
CCDC60-204ENST00000539847 J3KTA2 159 aa7.12□□□□□ -1.27
CCDC60-204ENST00000539847 WWP2O00308 870 aa7.12□□□□□ -1.27
CCDC60-204ENST00000539847 CTDSPLO15194 276 aa7.12□□□□□ -1.27
CCDC60-204ENST00000539847 TMPRSS2O15393 492 aa7.12□□□□□ -1.27
CCDC60-204ENST00000539847 NDUFA2O43678 99 aa7.12□□□□□ -1.27
CCDC60-204ENST00000539847 GSTZ1O43708 216 aaPredicted RBP7.12□□□□□ -1.27
CCDC60-204ENST00000539847 TLX2O43763 284 aaPredicted RBP7.12□□□□□ -1.27
CCDC60-204ENST00000539847 OR10H3O60404 316 aa7.12□□□□□ -1.27
CCDC60-204ENST00000539847 PLOD3O60568 738 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms