RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 C5AR1P21730 350 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 BTN3A2P78410 334 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 DGCR2P98153 550 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 E2F1Q01094 437 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 BTN1A1Q13410 526 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 EXOSC2Q13868 293 aaKnown RBP11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 CEBPEQ15744 281 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 HYAL4Q2M3T9 481 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 FAAP20Q6NZ36 180 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC36A4Q6YBV0 504 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 SERPINA12Q8IW75 414 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 ZNF687Q8N1G0 1237 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 OR7G2Q8NG99 324 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 OR14C36Q8NHC7 312 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 CCL4L1Q8NHW4 92 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 PHOSPHO2Q8TCD6 241 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 SFXN5Q8TD22 340 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 RFT1Q96AA3 541 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 HCAR1Q9BXC0 346 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC17A9Q9BYT1 436 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 CD93Q9NPY3 652 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 PCDHGB7Q9Y5F8 929 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 K7EQS6 105 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 LGALS8O00214 317 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 CASC3O15234 703 aaKnown RBP11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC31A1O15431 190 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 SNRPBP14678 240 aaKnown RBP11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 CSNK2A2P19784 350 aaPredicted RBP11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 AK4P27144 223 aaPredicted RBP11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 MAGEB1P43366 347 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 SNTA1Q13424 505 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 LGALSLQ3ZCW2 172 aaPredicted RBP11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 VASNQ6EMK4 673 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 OR4N5Q8IXE1 308 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 NRMQ8IXM6 262 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 RAB42Q8N4Z0 105 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 TMEM99Q8N816 258 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 CYB561A3Q8NBI2 242 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 OR51L1Q8NGJ5 315 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 ANGPTL6Q8NI99 470 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 SAMD8Q96LT4 415 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 SARGQ9BW04 601 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 SPRTNQ9H040 489 aaPredicted RBP11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 CAPN10Q9HC96 672 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 DPP7Q9UHL4 492 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 DOCK8Q8NF50 2099 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 TRBV23OR9-2A0A075B6M9 112 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 POM121BA6NF01 834 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 H3BUI4 141 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 EMC8O43402 210 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 ANKRD34CP0C6C1 535 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 PPP2CBP62714 309 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 PPP2CAP67775 309 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 OC90Q02509 493 aaPredicted RBP11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 SGCGQ13326 291 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 MFSD9Q8NBP5 474 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 OR56A1Q8NGH5 318 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 GANCQ8TET4 914 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 TMEM255BQ8WV15 326 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 FGF14Q92915 247 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 ZNF649Q9BS31 505 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 APOOQ9BUR5 198 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 SPATA5L1Q9BVQ7 753 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 GSDMCQ9BYG8 508 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 MRPS18AQ9NVS2 196 aaKnown RBP11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 GDE1Q9NZC3 331 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 H2AFY2Q9P0M6 372 aaPredicted RBP11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 RABL2AQ9UBK7 228 aaPredicted RBP11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 FBXL4Q9UKA2 621 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 RWDD3Q9Y3V2 267 aa11.67□□□□□ -0.54
SFSWAP-208ENST00000539506 A0A1W2PRG6 482 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 H0Y8X5 98 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 UBXN7O94888 489 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 HPXP02790 462 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 HLA-DPB1P04440 258 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 ACADMP11310 421 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 KIR2DL1P43626 348 aaPredicted RBP11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 ERVK-21P61565 698 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 TGM3Q08188 693 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 FZD5Q13467 585 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 NDUFA9Q16795 377 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 DUSP6Q16828 381 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 C3orf38Q5JPI3 329 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 TMEM65Q6PI78 240 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 SIAH3Q8IW03 269 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 ZNF527Q8NB42 609 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 ENTPD4Q9Y227 616 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 TMEM5Q9Y2B1 443 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 CDC42EP2O14613 210 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 ADH1BP00325 375 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 ZNF888P0CJ79 500 aaPredicted RBP11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 POU3F2P20265 443 aaPredicted RBP11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 STOMP27105 288 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 TEAD1P28347 426 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 MPIP34949 423 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 TALDO1P37837 337 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 RFX3P48380 749 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 RPS21P63220 83 aaKnown RBP11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 PARM1Q6UWI2 310 aa11.66□□□□□ -0.54
SFSWAP-208ENST00000539506 FRRS1Q6ZNA5 592 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms