RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ACOT12Q8WYK0 555 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 CLIP3Q96DZ5 547 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 TM4SF19Q96DZ7 209 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 SAMD8Q96LT4 415 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 SDF2Q99470 211 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 UBQLN3Q9H347 655 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 RBFOX1Q9NWB1 397 aaKnown RBP13.5□□□□□ -0.25
CDCA3-207ENST00000538862 GMEB2Q9UKD1 530 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 PRELID1Q9Y255 219 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 CSNK1G3Q9Y6M4 447 aa13.5□□□□□ -0.25
CDCA3-207ENST00000538862 DNAH14Q0VDD8 3507 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 PRSS38A1L453 326 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 TRAPPC13A5PLN9 417 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 UNC119BA6NIH7 251 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 SLC19A2O60779 497 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 TLX1P31314 330 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 MAP2K3P46734 347 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 GCGRP47871 477 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 SPEM2Q0P670 501 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 CDK10Q15131 360 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 ZNF791Q3KP31 576 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 VASNQ6EMK4 673 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 FBXO42Q6P3S6 717 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 COL26A1Q96A83 441 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 DCLRE1CQ96SD1 692 aaKnown RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 PRSS27Q9BQR3 290 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 ZNF350Q9GZX5 532 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 DUSP15Q9H1R2 295 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 KCNN2Q9H2S1 579 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 PIGUQ9H490 435 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 FGF22Q9HCT0 170 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 PARD6AQ9NPB6 346 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 SCN3AQ9NY46 2000 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 URADA6NGE7 173 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 BTN3A3O00478 584 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 SOCS6O14544 535 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 TRIM3O75382 744 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 SLC2A10O95528 541 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 PRKAR1AP10644 381 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 RPS4Y1P22090 263 aaKnown RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 PAICSP22234 425 aaKnown RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 SSTR4P31391 388 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 DUSP5Q16690 384 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 RPL13AP3Q6NVV1 102 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 PLET1Q6UQ28 207 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 KIAA1324Q6UXG2 1013 aaKnown RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 TMEM91Q6ZNR0 172 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 MEPCEQ7L2J0 689 aaKnown RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 KLBQ86Z14 1044 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 ZNF619Q8N2I2 560 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 ACBD7Q8N6N7 88 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 SIMC1Q8NDZ2 872 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 OR52L1Q8NGH7 329 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 JPH3Q8WXH2 748 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 OTULINQ96BN8 352 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 MKRN2Q9H000 416 aaKnown RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 OR52D1Q9H346 318 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 MARCH7Q9H992 704 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 TBC1D29Q9UFV1 150 aa13.49□□□□□ -0.25
CDCA3-207ENST00000538862 NUFIP1Q9UHK0 495 aaKnown RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 ZNF223Q9UK11 482 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 C19orf53Q9UNZ5 99 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-207ENST00000538862 SHISA3A0PJX4 238 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 TNFSF14O43557 240 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 RNF13O43567 381 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 B3GALT2O43825 422 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 RGS9O75916 674 aaPredicted RBP13.48□□□□□ -0.25
CDCA3-207ENST00000538862 DBIP07108 87 aaKnown RBP13.48□□□□□ -0.25
CDCA3-207ENST00000538862 ZGLP1P0C6A0 271 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 CPMP14384 443 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 CD53P19397 219 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 KIAA1024LP59773 190 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 IL18Q14116 193 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 KIR2DS3Q14952 304 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 EXOSC6Q5RKV6 272 aaKnown RBP13.48□□□□□ -0.25
CDCA3-207ENST00000538862 NOXA1Q86UR1 476 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 GALNT12Q8IXK2 581 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 DEFB119Q8N690 84 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 SIRT6Q8N6T7 355 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 ASCC1Q8N9N2 400 aaKnown RBP13.48□□□□□ -0.25
CDCA3-207ENST00000538862 GIMAP1Q8WWP7 306 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 ASB12Q8WXK4 309 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 SENP5Q96HI0 755 aaPredicted RBP13.48□□□□□ -0.25
CDCA3-207ENST00000538862 RNF170Q96K19 258 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 MRGPRX1Q96LB2 322 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 FCRL4Q96PJ5 515 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 OR2A5Q96R48 311 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 CD180Q99467 661 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 TMEM43Q9BTV4 400 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 ARRDC1-AS1Q9H2J1 176 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 SRMSQ9H3Y6 488 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 SMOC1Q9H4F8 434 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 SIDT1Q9NXL6 827 aaKnown RBP13.48□□□□□ -0.25
CDCA3-207ENST00000538862 BABAM2Q9NXR7 383 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 DAPP1Q9UN19 280 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 CYP8B1Q9UNU6 501 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 SATB2Q9UPW6 733 aa13.48□□□□□ -0.25
CDCA3-207ENST00000538862 CD8B2A6NJW9 211 aa13.47□□□□□ -0.25
CDCA3-207ENST00000538862 CENPBD1B2RD01 187 aa13.47□□□□□ -0.25
CDCA3-207ENST00000538862 SGK494L7N484 410 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms