RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 GALNSP34059 522 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 PTGER1P34995 402 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 CHI3L1P36222 383 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 KCNJ5P48544 419 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 MRPL19P49406 292 aaKnown RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 ERFP50548 548 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 ATP4BP51164 291 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 CCL11P51671 97 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 POLR2JP52435 117 aaKnown RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 AGFG1P52594 562 aaKnown RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 EFNA3P52797 238 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 DGKQP52824 942 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 NR1H2P55055 460 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 SOX8P57073 446 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 UFM1P61960 85 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 RAB1AP62820 205 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 RHDQ02161 417 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 PIGFQ07326 219 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 ZNF155Q12901 538 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 CHAF1BQ13112 559 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 DCTN2Q13561 401 aaKnown RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 RAPSNQ13702 412 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 CYLC2Q14093 348 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 RCAN2Q14206 197 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 MAPRE2Q15555 327 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 ZNHIT3Q15649 155 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 LTB4RQ15722 352 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 MAPKAPK3Q16644 382 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 PRICKLE4Q2TBC4 344 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 COL28A1Q2UY09 1125 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 AGKQ53H12 422 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 CRB2Q5IJ48 1285 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 SPANXN4Q5MJ08 99 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 C6orf10Q5SRN2 563 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 AGAP7PQ5VUJ5 663 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 OR4F3Q6IEY1 312 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 JMJD6Q6NYC1 403 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 C19orf48Q6RUI8 117 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 TMEM107Q6UX40 140 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 ANGPTL8Q6UXH0 198 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 HSDL2Q6YN16 418 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 RHOUQ7L0Q8 258 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 ZNF551Q7Z340 670 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 CAMKMTQ7Z624 323 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 ANKRD46Q86W74 232 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 SNX32Q86XE0 403 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 HPS6Q86YV9 775 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 RIMKLAQ8IXN7 391 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 GALNT16Q8N428 558 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 Q8NA96 180 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 OR7G1Q8NGA0 311 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 OR5L2Q8NGL0 311 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 OR4A15Q8NGL6 344 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 OR9I1Q8NGQ6 314 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 OR1N1Q8NGS0 311 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 M1APQ8TC57 530 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 ZNF675Q8TD23 568 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 PTPMT1Q8WUK0 201 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 SNRNP27Q8WVK2 155 aaKnown RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 NEU4Q8WWR8 484 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 TM9SF4Q92544 642 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 KAT2AQ92830 837 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 UCN3Q969E3 161 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 NMD3Q96D46 503 aaKnown RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 COQ8BQ96D53 544 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 ITCHQ96J02 903 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 MAGED4Q96JG8 741 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 TEX37Q96LM6 180 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 IMMP1LQ96LU5 166 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 ZNF681Q96N22 645 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 AGAP4Q96P64 663 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 MS4A4EQ96PG1 132 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 PANX1Q96RD7 426 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 GAL3ST4Q96RP7 486 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 TRIB1Q96RU8 372 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 MESP1Q9BRJ9 268 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 SLC25A23Q9BV35 468 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 MLST8Q9BVC4 326 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 DEFB126Q9BYW3 111 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 LHPPQ9H008 270 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 RBM38Q9H0Z9 239 aaKnown RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 GLIPR2Q9H4G4 154 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 EPS8L2Q9H6S3 715 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 C3orf14Q9HBI5 128 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 GPR35Q9HC97 309 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 GALNT9Q9HCQ5 603 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 EQTNQ9NQ60 294 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 ZCCHC3Q9NUD5 404 aaKnown RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 CHCHD3Q9NX63 227 aaKnown RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 TAS2R9Q9NYW1 312 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 MAT2BQ9NZL9 334 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 VSX1Q9NZR4 365 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-208ENST00000538266 CCDC167Q9P0B6 97 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 PTGFRNQ9P2B2 879 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 PRODH2Q9UF12 536 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 KCNE5Q9UJ90 142 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 RIMS3Q9UJD0 308 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 CES1P1Q9UKY3 287 aa3.97□□□□□ -1.77
SNHG1-208ENST00000538266 VPS4AQ9UN37 437 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms