RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 L3MBTL1Q9Y468 752 aa7.56□□□□□ -1.2
SPARC-208ENST00000538026 DTNAQ9Y4J8 743 aa7.56□□□□□ -1.2
SPARC-208ENST00000538026 PCDHB14Q9Y5E9 798 aa7.56□□□□□ -1.2
SPARC-208ENST00000538026 ACANP16112 2415 aa7.56□□□□□ -1.2
SPARC-208ENST00000538026 H0Y3Z8 333 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 H3BML4 177 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 RFXANKO14593 260 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 ADAMDEC1O15204 470 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 STX11O75558 287 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 AQP8O94778 261 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 H6PDO95479 791 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 IL6P05231 212 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 KRT16P08779 473 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 ZCCHC18P0CG32 403 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 PEPDP12955 493 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 ETFAP13804 333 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 PRKCAP17252 672 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 KLK2P20151 261 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 BMP5P22003 454 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 RPS4Y1P22090 263 aaKnown RBP7.55□□□□□ -1.2
SPARC-208ENST00000538026 KIR2DL2P43627 348 aaPredicted RBP7.55□□□□□ -1.2
SPARC-208ENST00000538026 CLK3P49761 638 aaKnown RBP7.55□□□□□ -1.2
SPARC-208ENST00000538026 FOXF1Q12946 379 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 FBXL19-AS1Q494R0 122 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 SLC25A53Q5H9E4 307 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 ENPP6Q6UWR7 440 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 DLEU7Q6UYE1 221 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 MEX3BQ6ZN04 569 aaKnown RBP7.55□□□□□ -1.2
SPARC-208ENST00000538026 MTERF4Q7Z6M4 381 aaKnown RBP7.55□□□□□ -1.2
SPARC-208ENST00000538026 MISPQ8IVT2 679 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 GCNT2Q8N0V5 402 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 METTL25Q8N6Q8 603 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 VPS37AQ8NEZ2 397 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 FNDC9Q8TBE3 224 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 CNOT9Q92600 299 aaKnown RBP7.55□□□□□ -1.2
SPARC-208ENST00000538026 WNT2BQ93097 391 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 INTS12Q96CB8 462 aaKnown RBP7.55□□□□□ -1.2
SPARC-208ENST00000538026 STARD4Q96DR4 205 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 RNF145Q96MT1 663 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 HOXD1Q9GZZ0 328 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 TMEM185BQ9H7F4 350 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 PTGES2Q9H7Z7 377 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 ZNF629Q9UEG4 869 aaPredicted RBP7.55□□□□□ -1.2
SPARC-208ENST00000538026 PCDHGB4Q9UN71 923 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 AP4B1Q9Y6B7 739 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 F8P00451 2351 aa7.55□□□□□ -1.2
SPARC-208ENST00000538026 NIPBLQ6KC79 2804 aaeCLIP7.55□□□□□ -1.2
SPARC-208ENST00000538026 PRRC2AP48634 2157 aaKnown RBP7.54□□□□□ -1.2
SPARC-208ENST00000538026 A0A087WZY1 265 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 A0A1W2PNV4 684 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 DUXAA6NLW8 204 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 HSPB2A8KAH6 182 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 POLR3GO15318 223 aaPredicted RBP7.54□□□□□ -1.2
SPARC-208ENST00000538026 SEC14L5O43304 696 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 SOX30O94993 753 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 IL18BPO95998 194 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 CGAP01215 116 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 TFPTP0C1Z6 253 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 TMIGD3P0DMS9 266 aaPredicted RBP7.54□□□□□ -1.2
SPARC-208ENST00000538026 BMP2P12643 396 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 ZNF17P17021 662 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 POU3F2P20265 443 aaPredicted RBP7.54□□□□□ -1.2
SPARC-208ENST00000538026 ATP6V1C1P21283 382 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 CTSSP25774 331 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 CHI3L1P36222 383 aaPredicted RBP7.54□□□□□ -1.2
SPARC-208ENST00000538026 P2RX1P51575 399 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 RAC1P63000 192 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 SF3A3Q12874 501 aaKnown RBP eCLIP7.54□□□□□ -1.2
SPARC-208ENST00000538026 FGFBP1Q14512 234 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 HSPB2Q16082 182 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 SLC25A35Q3KQZ1 300 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 LRIF1Q5T3J3 769 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 VWA1Q6PCB0 445 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 BHLHB9Q6PI77 547 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 MSANTD1Q6ZTZ1 278 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 C22orf34Q6ZV56 151 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 BTLAQ7Z6A9 289 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 RETREG3Q86VR2 466 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 COMTD1Q86VU5 262 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 ZNF619Q8N2I2 560 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 OR5W2Q8NH69 310 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 FBXO27Q8NI29 283 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 SLC38A5Q8WUX1 472 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 DYDC1Q8WWB3 177 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 STON2Q8WXE9 905 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 SMPDL3BQ92485 455 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 ZBTB8AQ96BR9 441 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 TRNT1Q96Q11 434 aaKnown RBP7.54□□□□□ -1.2
SPARC-208ENST00000538026 ZBTB18Q99592 522 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 PIGQQ9BRB3 760 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 THUMPD3Q9BV44 507 aaKnown RBP7.54□□□□□ -1.2
SPARC-208ENST00000538026 SRXN1Q9BYN0 137 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 LAT2Q9GZY6 243 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 COQ10BQ9H8M1 238 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 RNF122Q9H9V4 155 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 TPT1P8Q9HAU6 139 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 NPHS2Q9NP85 383 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 RLIMQ9NVW2 624 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 CCDC167Q9P0B6 97 aa7.54□□□□□ -1.2
SPARC-208ENST00000538026 VAPAQ9P0L0 249 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms