RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 GATA3P23771 443 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 EMDP50402 254 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 PSMD4P55036 377 aaKnown RBP7.99□□□□□ -1.13
USP28-205ENST00000537706 ZNHIT3Q15649 155 aaPredicted RBP7.99□□□□□ -1.13
USP28-205ENST00000537706 C18orf21Q32NC0 220 aaPredicted RBP7.99□□□□□ -1.13
USP28-205ENST00000537706 ZNF628Q5EBL2 1059 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 REP15Q6BDI9 236 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 ACSM5Q6NUN0 579 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 KLHL24Q6TFL4 600 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 IKBIPQ70UQ0 350 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 TRABD2AQ86V40 505 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 SLC44A2Q8IWA5 706 aaPredicted RBP7.99□□□□□ -1.13
USP28-205ENST00000537706 CCDC116Q8IYX3 515 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 OR4F5Q8NH21 305 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 WFDC12Q8WWY7 111 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 TMIGD2Q96BF3 282 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 DUX5Q96PT3 197 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 PLK3Q9H4B4 646 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 NARFLQ9H6Q4 476 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 TMEM185BQ9H7F4 350 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 BCO1Q9HAY6 547 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 PFDN4Q9NQP4 134 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 LGALS13Q9UHV8 139 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 ZNF639Q9UID6 485 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 MID2Q9UJV3 735 aa7.99□□□□□ -1.13
USP28-205ENST00000537706 CADP27708 2225 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 A0A1W2PR80 420 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 A0A1W2PS29 197 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 SMIM23A6NLE4 172 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 GMFGO60234 142 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 CCNT2O60583 730 aaKnown RBP7.98□□□□□ -1.13
USP28-205ENST00000537706 CBX7O95931 251 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 CRYBA1P05813 215 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 OR4A8P0C604 315 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 ADRA2CP18825 462 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 PCGF2P35227 344 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 MAGEA4P43358 317 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 FAM189A2Q15884 450 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 DECR1Q16698 335 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 DCAF12L2Q5VW00 463 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 ANKRD22Q5VYY1 191 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 TTC19Q6DKK2 380 aaPredicted RBP7.98□□□□□ -1.13
USP28-205ENST00000537706 SULT1C3Q6IMI6 304 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 GALNT5Q7Z7M9 940 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 PPIL6Q8IXY8 311 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 RIBC1Q8N443 379 aaPredicted RBP7.98□□□□□ -1.13
USP28-205ENST00000537706 OR7G3Q8NG95 312 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 BCAS4Q8TDM0 211 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 C22orf15Q8WYQ4 148 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 LRRC58Q96CX6 371 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 ERP27Q96DN0 273 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 PPCSQ9HAB8 311 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 XAB2Q9HCS7 855 aaKnown RBP7.98□□□□□ -1.13
USP28-205ENST00000537706 TREM2Q9NZC2 230 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 ZNF780BQ9Y6R6 833 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 EXPH5Q8NEV8 1989 aa7.98□□□□□ -1.13
USP28-205ENST00000537706 A0A087WUV0 522 aaPredicted RBP7.97□□□□□ -1.13
USP28-205ENST00000537706 IGLV3-32A0A0A0MS00 114 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 TLDC2A0PJX2 215 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 C7orf72A4D263 438 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 C17orf51A8MQB3 221 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 B4DXG7 233 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 FADS1O60427 444 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 ERAL1O75616 437 aaKnown RBP7.97□□□□□ -1.13
USP28-205ENST00000537706 MLNP12872 115 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 SFTPDP35247 375 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 GGT5P36269 586 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 HSPA7P48741 367 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 POU4F1Q01851 419 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 BEAN1Q3B7T3 259 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 CDKL4Q5MAI5 379 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 FBXW9Q5XUX1 488 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 C1orf229Q6ZS94 237 aaPredicted RBP7.97□□□□□ -1.13
USP28-205ENST00000537706 MARCH3Q86UD3 253 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 LILRA2Q8N149 483 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 C17orf78Q8N4C9 275 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 RAB39BQ96DA2 213 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 RNF145Q96MT1 663 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 WWC2-AS2Q96NR7 200 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 C1QTNF5Q9BXJ0 243 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 G6PC2Q9NQR9 355 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 CA10Q9NS85 328 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 EMC3Q9P0I2 261 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 E7ESA3 106 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 CLDN34H7C241 214 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 NDUFAB1O14561 156 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 SLITRK5O94991 958 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 FAM107AO95990 144 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 CT45A8P0DMV1 189 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 CT45A9P0DMV2 189 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 PCSK2P16519 638 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 PAX7P23759 505 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 BSGP35613 385 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 MANFP55145 182 aaKnown RBP7.97□□□□□ -1.13
USP28-205ENST00000537706 ARL4CP56559 192 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 MGAT2Q10469 447 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 TSNQ15631 228 aaKnown RBP7.97□□□□□ -1.13
USP28-205ENST00000537706 ADRM1Q16186 407 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 TAF9Q16594 264 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 TRMT12Q53H54 448 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms