RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 TMUB2Q71RG4 321 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF584Q8IVC4 421 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 SIAH3Q8IW03 269 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 SLC22A15Q8IZD6 547 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 STEAP2Q8NFT2 490 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR5W2Q8NH69 310 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 BBS10Q8TAM1 723 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 LURAP1Q96LR2 239 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CD180Q99467 661 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 KATNB1Q9BVA0 655 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 MAN2C1Q9NTJ4 1040 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ZDHHC3Q9NYG2 299 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CTDSPLO15194 276 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ST8SIA5O15466 376 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ITPKBP27987 946 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 WDR5P61964 334 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 VAMP2P63027 116 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 GAS6Q14393 721 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 GPR176Q14439 515 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 HNF4GQ14541 408 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 NKG7Q16617 165 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 FAM209BQ5JX69 171 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 PRSS36Q5K4E3 855 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 PSRC1Q6PGN9 363 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 C5orf46Q6UWT4 87 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 UNC5DQ6UXZ4 953 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 GAREM2Q75VX8 874 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 SPNS2Q8IVW8 549 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 COX18Q8N8Q8 333 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 OR10G6Q8NH81 332 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 STK35Q8TDR2 534 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 NEK7Q8TDX7 302 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 BRI3BPQ8WY22 251 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 OR2AG1Q9H205 316 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM184CQ9NVA4 438 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 MRTO4Q9UKD2 239 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 COL5A3P25940 1745 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 CITO14578 2027 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 RHPN2P1A8MT19 583 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF878C9JN71 531 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 RDH16O75452 317 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 RAB6AP20340 208 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ARFRP1Q13795 201 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 LTB4RQ15722 352 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 HENMT1Q5T8I9 393 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 SLC8B1Q6J4K2 584 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 AGTRAPQ6RW13 159 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 CD300LDQ6UXZ3 194 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 OR8D4Q8NGM9 314 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM19Q96HH6 336 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 FGF20Q9NP95 211 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 CRTAC1Q9NQ79 661 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 MRPS18AQ9NVS2 196 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 CLEC2DQ9UHP7 191 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 CAMK2AQ9UQM7 478 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 A0A0A6YYH2 397 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 GXYLT2A0PJZ3 443 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 A6NJ64 397 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 PRAMEF11O60813 436 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ZDHHC11BP0C7U3 371 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 AHCYP23526 432 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 HSD17B2P37059 387 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TNFRSF17Q02223 184 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 SGCGQ13326 291 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 UBXN2BQ14CS0 331 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TCEAL6Q6IPX3 200 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 RPL13AP3Q6NVV1 102 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TRILQ7L0X0 811 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 AMIGO3Q86WK7 504 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 GPR135Q8IZ08 494 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 FBXO15Q8NCQ5 510 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 NLGN4YQ8NFZ3 816 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 THEM6Q8WUY1 208 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM169Q96HH4 297 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TEX37Q96LM6 180 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 EFCAB11Q9BUY7 163 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 EDEM2Q9BV94 578 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 HEXA-AS1Q9H8Q6 139 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ADAP2Q9NPF8 381 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 PLAGL1Q9UM63 463 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TRBV2A0A0J9YWF9 115 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 GFRA2O00451 464 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 LDB2O43679 373 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 NMBP08949 121 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 PSMB1P20618 241 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 SLC19A1P41440 591 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 PREPP48147 710 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 RAB33AQ14088 237 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 SSX1Q16384 188 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 RGS7BPQ6MZT1 257 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF565Q8N9K5 539 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 NECAB3Q96P71 396 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 DDOQ99489 341 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 VRK1Q99986 396 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 MRPL17Q9NRX2 175 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 LSM2Q9Y333 95 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TRAV18A0A075B6X5 111 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 BORCS7-ASMTA0A0B4J1R7 106 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 A0A0D9SEW6 157 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 GLOD5A6NK44 160 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms