RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CEACAM8P31997 349 aaPredicted RBP6.37□□□□□ -1.39
YBX3-206ENST00000536823 TIMP3P35625 211 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 RPL3P39023 403 aaKnown RBP6.37□□□□□ -1.39
YBX3-206ENST00000536823 MAP3K8P41279 467 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 MANFP55145 182 aaKnown RBP6.37□□□□□ -1.39
YBX3-206ENST00000536823 GAB1Q13480 694 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 SF3B4Q15427 424 aaKnown RBP eCLIP6.37□□□□□ -1.393e-6■■■□□ 15.4
YBX3-206ENST00000536823 CHI3L2Q15782 390 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 VPS26BQ4G0F5 336 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 ATP6AP1LQ52LC2 224 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 TMEM177Q53S58 311 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 TNFAIP8L3Q5GJ75 292 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 C6orf136Q5SQH8 315 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 CEP85LQ5SZL2 805 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 NSUN5P2Q63ZY6 315 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 LRIG3Q6UXM1 1119 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 WDR53Q7Z5U6 358 aaPredicted RBP6.37□□□□□ -1.39
YBX3-206ENST00000536823 CROCCP2Q86T23 111 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 EXOC3L1Q86VI1 746 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 NUDCD3Q8IVD9 361 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 FADS6Q8N9I5 356 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 CDRT4Q8N9R6 151 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 FNDC5Q8NAU1 212 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 OR7A2PQ8NGA2 310 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 OR4K17Q8NGC6 315 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 OR14L1PQ8NHC6 308 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 CEP70Q8NHQ1 597 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 PPP1R14CQ8TAE6 165 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 GIMAP5Q96F15 307 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 C14orf79Q96F83 325 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 PGM2Q96G03 612 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 RMND5BQ96G75 393 aaPredicted RBP6.37□□□□□ -1.39
YBX3-206ENST00000536823 WDYHV1Q96HA8 205 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 ZIM3Q96PE6 472 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 MS4A4EQ96PG1 132 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 C1orf50Q9BV19 199 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 UCK2Q9BZX2 261 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 C3orf14Q9HBI5 128 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 SIRT3Q9NTG7 399 aaPredicted RBP6.37□□□□□ -1.39
YBX3-206ENST00000536823 TAS2R10Q9NYW0 307 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 MRTO4Q9UKD2 239 aaKnown RBP6.37□□□□□ -1.39
YBX3-206ENST00000536823 MRPS18CQ9Y3D5 142 aaKnown RBP6.37□□□□□ -1.39
YBX3-206ENST00000536823 ROS1P08922 2347 aa6.37□□□□□ -1.39
YBX3-206ENST00000536823 ITPR3Q14573 2671 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 MBD3L4A6NDZ8 208 aaPredicted RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 MBD3L3A6NE82 208 aaPredicted RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 MBD3L5A6NJ08 208 aaPredicted RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 HSPB2A8KAH6 182 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 C17orf51A8MQB3 221 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 EMC8O43402 210 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 ITM2AO43736 263 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 SNUPNO95149 360 aaKnown RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 ZWINTO95229 277 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 UTS2O95399 124 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 HSPA4LO95757 839 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 IGKV1D-16P01601 117 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 ACP2P11117 423 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 CPN1P15169 458 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 EFNA1P20827 205 aaPredicted RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 DPP4P27487 766 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 GABRA3P34903 492 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 LHX2P50458 406 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 ASCL1P50553 236 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 PRKAG1P54619 331 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 PSMD4P55036 377 aaKnown RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 DSCR4P56555 118 aaPredicted RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 WNT3P56703 355 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 C21orf58P58505 322 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 ABCE1P61221 599 aaKnown RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 PRR5P85299 388 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 MAD2L1Q13257 205 aaPredicted RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 RCAN2Q14206 197 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 GANABQ14697 944 aaKnown RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 PTGR1Q14914 329 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 MLC1Q15049 377 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 HSPB2Q16082 182 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 PDCD2Q16342 344 aaPredicted RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.36□□□□□ -1.39
YBX3-206ENST00000536823 SMU1Q2TAY7 513 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 IL23RQ5VWK5 629 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 OR5M10Q6IEU7 315 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 MFSD12Q6NUT3 480 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 AAGABQ6PD74 315 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 ENPP6Q6UWR7 440 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 SZRD1Q7Z422 152 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 ADGRE4PQ86SQ3 457 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 IFNEQ86WN2 208 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 LIX1LQ8IVB5 337 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 KIRREL3Q8IZU9 778 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 RELL2Q8NC24 303 aaPredicted RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 NAXEQ8NCW5 288 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 OR2M3Q8NG83 312 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 MBD3L2Q8NHZ7 208 aaPredicted RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 FBXO30Q8TB52 745 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 ZPLD1Q8TCW7 415 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 GPR151Q8TDV0 419 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 SLC9A6Q92581 669 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 TUBGCP3Q96CW5 907 aa6.36□□□□□ -1.39
YBX3-206ENST00000536823 FAM120BQ96EK7 910 aaKnown RBP6.36□□□□□ -1.39
YBX3-206ENST00000536823 LURAP1Q96LR2 239 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms