RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ZNF852Q6ZMS4 543 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 OR6S1Q8NH40 331 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 ADAT1Q9BUB4 502 aaKnown RBP13.03□□□□□ -0.32
LIG1-203ENST00000536218 EFCAB11Q9BUY7 163 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 SGPP1Q9BX95 441 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 DMRT3Q9NQL9 472 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 FAM120CQ9NX05 1096 aaKnown RBP13.03□□□□□ -0.32
LIG1-203ENST00000536218 ACSL6Q9UKU0 697 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 A0A0G2JN53 185 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 C17orf113A0A1B0GUU1 675 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 H7BY64 318 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 SLC31A1O15431 190 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 SLC19A2O60779 497 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 RAB36O95755 333 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 SPP1P10451 314 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 HOXB9P17482 250 aaPredicted RBP13.03□□□□□ -0.32
LIG1-203ENST00000536218 MAPK9P45984 424 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 GAB1Q13480 694 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 RBMS2Q15434 407 aaKnown RBP13.03□□□□□ -0.32
LIG1-203ENST00000536218 Q3ZCU0 254 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 SLC6A19Q695T7 634 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 SFRP4Q6FHJ7 346 aaPredicted RBP13.03□□□□□ -0.32
LIG1-203ENST00000536218 CEACAM20Q6UY09 585 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 LHFPL3Q86UP9 236 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 OR1M1Q8NGA1 313 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 OR8J2Q8NGG1 315 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 OR1S1Q8NH92 325 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 RNFT2Q96EX2 444 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 PRAP1Q96NZ9 151 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 PDCD10Q9BUL8 212 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 TRMT61BQ9BVS5 477 aaKnown RBP13.03□□□□□ -0.32
LIG1-203ENST00000536218 DPEP2Q9H4A9 486 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 ACER3Q9NUN7 267 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 DOCK8Q8NF50 2099 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 C6orf47O95873 294 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 EIF4EP06730 217 aaKnown RBP13.02□□□□□ -0.32
LIG1-203ENST00000536218 CD79BP40259 229 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 ASMTP46597 345 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 DLX2Q07687 328 aaPredicted RBP13.02□□□□□ -0.32
LIG1-203ENST00000536218 VEZF1Q14119 521 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 HLXQ14774 488 aaPredicted RBP13.02□□□□□ -0.32
LIG1-203ENST00000536218 ITPRIPL2Q3MIP1 535 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 Q6ZTK2 550 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 JAZF1Q86VZ6 243 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 C11orf65Q8NCR3 313 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 ADAMTS14Q8WXS8 1223 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 SGK3Q96BR1 496 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 WDR89Q96FK6 387 aaPredicted RBP13.02□□□□□ -0.32
LIG1-203ENST00000536218 ABHD1Q96SE0 405 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 RNF32Q9H0A6 362 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 WDR26Q9H7D7 661 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 MED9Q9NWA0 146 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 ASB4Q9Y574 426 aa13.02□□□□□ -0.32
LIG1-203ENST00000536218 PRAMEF25A6NGN4 478 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 ANKDD1BA6NHY2 528 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 MPTX1A8MV57 137 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 DISC1C4P0D8 188 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 GPR31O00270 319 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 ZNF593O00488 134 aaPredicted RBP13.02□□□□□ -0.33
LIG1-203ENST00000536218 OR10H3O60404 316 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 HSD3B1P14060 373 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 HSD3B2P26439 372 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 ACSL1P33121 698 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 PITPNBP48739 271 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 HYAL1Q12794 435 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 SGCGQ13326 291 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 IRF4Q15306 451 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 SGCAQ16586 387 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 CRB2Q5IJ48 1285 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 LRRC56Q8IYG6 542 aaPredicted RBP13.02□□□□□ -0.33
LIG1-203ENST00000536218 RAB7BQ96AH8 199 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 MRPL48Q96GC5 212 aaKnown RBP13.02□□□□□ -0.33
LIG1-203ENST00000536218 COX14Q96I36 57 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 LINC00615Q96LM1 132 aaPredicted RBP13.02□□□□□ -0.33
LIG1-203ENST00000536218 TSNAXQ99598 290 aaKnown RBP13.02□□□□□ -0.33
LIG1-203ENST00000536218 DCAF16Q9NXF7 216 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 MIOXQ9UGB7 285 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 ING1Q9UK53 422 aaPredicted RBP13.02□□□□□ -0.33
LIG1-203ENST00000536218 PCDHB11Q9Y5F2 797 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 FXYD6-FXYD2A0A087WZ82 144 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 SERTM1A2A2V5 107 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 FAM170BA6NMN3 283 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 TMEM229AB2RXF0 380 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 NPIPB8E9PQR5 432 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 DVL2O14641 736 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 PRMT3O60678 531 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 EIF1BO60739 113 aaKnown RBP13.02□□□□□ -0.33
LIG1-203ENST00000536218 SLC35G4P0C7Q5 338 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 SELLP14151 372 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 DRD2P14416 443 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 EIF1P41567 113 aaKnown RBP13.02□□□□□ -0.33
LIG1-203ENST00000536218 XKP51811 444 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 CAPZA1P52907 286 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 HBA1P69905 142 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 ZNF763Q0D2J5 394 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 C17orf64Q86WR6 236 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 MCATQ8IVS2 390 aaKnown RBP13.02□□□□□ -0.33
LIG1-203ENST00000536218 OXR1Q8N573 874 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 ELP4Q96EB1 424 aa13.02□□□□□ -0.33
LIG1-203ENST00000536218 F2RL3Q96RI0 385 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms