RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 INTS14Q96SY0 518 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 PARK7Q99497 189 aaKnown RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 NLNQ9BYT8 704 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 NAPBQ9H115 298 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 RABEP2Q9H5N1 569 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 SRD5A3Q9H8P0 318 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 ZNF355PQ9NSJ1 428 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 STARD5Q9NSY2 213 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 ACOXLQ9NUZ1 547 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 TMEM161AQ9NX61 479 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 PLA2G4CQ9UP65 541 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 ENTPD4Q9Y227 616 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 PLLPQ9Y342 182 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 FKBP7Q9Y680 259 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 ZNF469Q96JG9 3925 aaPredicted RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 ZSWIM8A7E2V4 1837 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 PLEKHH1Q9ULM0 1364 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 ARHGEF37A1IGU5 675 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 ZNF850A8MQ14 1090 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 UBE2CO00762 179 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 SLC30A4O14863 429 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 ZNF263O14978 683 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 TM9SF1O15321 606 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 ST8SIA3O43173 380 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 RBFOX2O43251 390 aaKnown RBP eCLIP0.08□□□□□ -2.4
COPB1-212ENST00000534771 CRCPO75575 148 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 SRP72O76094 671 aaKnown RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 GLCEO94923 617 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 SIX3O95343 332 aaPredicted RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 IGLV6-57P01721 117 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 P04436 131 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 IL4P05112 153 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 SFTPBP07988 381 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 TLX1NBP0CAT3 122 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 TDGF1P13385 188 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 GCFC2P16383 781 aaKnown RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 TGFBR2P37173 567 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 SLC26A3P40879 764 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 TNFSF9P41273 254 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 PRKCIP41743 596 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 KCNJ1P48048 391 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 UBE2AP49459 152 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 TDGF1P3P51864 188 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 PLK1P53350 603 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 TAS2R19P59542 299 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 PRKCDQ05655 676 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 SNTB2Q13425 540 aaKnown RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 ZKSCAN8Q15776 578 aaPredicted RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 RABL6Q3YEC7 729 aaPredicted RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 EPC2Q52LR7 807 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 CYBRD1Q53TN4 286 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 FAM120AOSQ5T036 256 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 ATF7IP2Q5U623 682 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 TMEM225Q6GV28 225 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 HACD2Q6Y1H2 254 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 ZNF573Q86YE8 665 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 NRMQ8IXM6 262 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 KLHL7Q8IXQ5 586 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 MLKLQ8NB16 471 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 NECAP1Q8NC96 275 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 ACER1Q8TDN7 264 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 SLC5A11Q8WWX8 675 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 TMEM37Q8WXS4 190 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 P3H4Q92791 437 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 RAB39BQ96DA2 213 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 TIMD4Q96H15 378 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 ERO1AQ96HE7 468 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 RAB3IPQ96QF0 476 aaPredicted RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 COG4Q9H9E3 785 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 PAK1IP1Q9NWT1 392 aaPredicted RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 CHCHD3Q9NX63 227 aaKnown RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 DUS2Q9NX74 493 aaKnown RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 ZNF226Q9NYT6 803 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 RIMS3Q9UJD0 308 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 FBXL5Q9UKA1 691 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 CDH9Q9ULB4 789 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 RAB23Q9ULC3 237 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 TRAPPC4Q9Y296 219 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 MRPS2Q9Y399 296 aaKnown RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 EXOSC1Q9Y3B2 195 aaKnown RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 CHTOPQ9Y3Y2 248 aaKnown RBP0.08□□□□□ -2.4
COPB1-212ENST00000534771 GMPPBQ9Y5P6 360 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 POMT1Q9Y6A1 747 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 S4R3C0 116 aa0.08□□□□□ -2.4
COPB1-212ENST00000534771 CABIN1Q9Y6J0 2220 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 NOTCH1P46531 2555 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 A0A0G2JRQ6 117 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 LOC100131303A0A0U1RQF7 123 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 A0A1B0GUL7 405 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 ESYT2A0FGR8 921 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 ZNF705EA8MWA4 302 aaPredicted RBP0.07□□□□□ -2.4
COPB1-212ENST00000534771 IDSB3KWA1 339 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 OVOL1O14753 267 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 NME6O75414 186 aaPredicted RBP0.07□□□□□ -2.4
COPB1-212ENST00000534771 ECI2O75521 394 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 STK17BO94768 372 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 GH1P01241 217 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 JCHAINP01591 159 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 SERPINF2P08697 491 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 PAX3P23760 479 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms