RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 HES7Q9BYE0 225 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 VN1R1Q9GZP7 353 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 SERHL2Q9H4I8 314 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 TMEM38AQ9H6F2 299 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 RNF167Q9H6Y7 350 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 SYNPO2LQ9H987 977 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 MRPS30Q9NP92 439 aaKnown RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 AKIP1Q9NQ31 210 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 ACER3Q9NUN7 267 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 TBC1D23Q9NUY8 699 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 SNX8Q9Y5X2 465 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 HSPE1-MOB4S4R3N1 261 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 ADGRG4Q8IZF6 3080 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 H7BY64 318 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 TMPRSS11DO60235 418 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 LCMT2O60294 686 aaKnown RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 PRKRAO75569 313 aaKnown RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 SULT1C4O75897 302 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 IGFBP1P08833 259 aaPredicted RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 PCSK2P16519 638 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 PPIBP23284 216 aaKnown RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 BSGP35613 385 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 CHI3L1P36222 383 aaPredicted RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 GGT2P36268 569 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 XCR1P46094 333 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 AVPR1BP47901 424 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 LIMS1P48059 325 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 PRIM2P49643 509 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 ITGADQ13349 1161 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 IFI44LQ53G44 452 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 PAGE2BQ5JRK9 111 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 TMEM211Q6ICI0 200 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 ZNF425Q6IV72 752 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 SLC25A25Q6KCM7 469 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 C16orf87Q6PH81 154 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 KLHL17Q6TDP4 642 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 PRSS48Q7RTY5 328 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 ANKRD37Q7Z713 158 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 HMGN2P46Q86SG4 172 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 P2RY8Q86VZ1 359 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 RBM45Q8IUH3 476 aaKnown RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 SLC44A2Q8IWA5 706 aaPredicted RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 MFSD4AQ8N468 514 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 GPR32P1Q8NGA4 272 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 OR4D11Q8NGI4 311 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 SMPDL3AQ92484 453 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 POP5Q969H6 163 aaKnown RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 REPS1Q96D71 796 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 OTUB1Q96FW1 271 aaPredicted RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 PRAP1Q96NZ9 151 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 OR2A5Q96R48 311 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 CXXC4Q9H2H0 198 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 MMP25Q9NPA2 562 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 TEX10Q9NXF1 929 aaPredicted RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 CORO2BQ9UQ03 480 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 IGHV3-20A0A0C4DH32 117 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 IGKV1-8A0A0C4DH67 115 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 PRAMEF27A3QJZ7 478 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 C4orf51C9J302 202 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 H0YIG0 161 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 ARAFP10398 606 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 BMP4P12644 408 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 PIK3CBP42338 1070 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 ALDH9A1P49189 494 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 LSM11P83369 360 aaKnown RBP eCLIP7.56□□□□□ -1.2
NEDD8-207ENST00000533242 MAT1AQ00266 395 aaKnown RBP7.56□□□□□ -1.2
NEDD8-207ENST00000533242 CD300CQ08708 224 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 HSPB3Q12988 150 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 MICAQ29983 383 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 LANCL3Q6ZV70 420 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 CCDC80Q76M96 950 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 GALNTL5Q7Z4T8 443 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 FGD2Q7Z6J4 655 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 UBE3DQ7Z6J8 389 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.56□□□□□ -1.2
NEDD8-207ENST00000533242 TGIF2LYQ8IUE0 185 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 DMRTC2Q8IXT2 367 aaPredicted RBP7.56□□□□□ -1.2
NEDD8-207ENST00000533242 RHOXF1Q8NHV9 184 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 RNF217Q8TC41 542 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 SLC38A5Q8WUX1 472 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 GGHQ92820 318 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 TM4SF18Q96CE8 201 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 FOXC2Q99958 501 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 ZNF559Q9BR84 538 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 COPS4Q9BT78 406 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 SLIRPQ9GZT3 109 aaKnown RBP7.56□□□□□ -1.2
NEDD8-207ENST00000533242 MIEF1Q9NQG6 463 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 SIRT3Q9NTG7 399 aaPredicted RBP7.56□□□□□ -1.2
NEDD8-207ENST00000533242 ATAD3AQ9NVI7 634 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 SCN3BQ9NY72 215 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 KCNN3Q9UGI6 736 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 PSORS1C1Q9UIG5 152 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 ERGIC3Q9Y282 383 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 PHF3Q92576 2039 aaKnown RBP7.56□□□□□ -1.2
NEDD8-207ENST00000533242 NF1P21359 2839 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 TRBV4-1A0A0J9YWV2 114 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 A0A1W2PS29 197 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 TRBC2A0A5B9 178 aa7.56□□□□□ -1.2
NEDD8-207ENST00000533242 ADAMDEC1O15204 470 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms