RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 SDC1P18827 310 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 SLC2A5P22732 501 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 SMAD4Q13485 552 aaKnown RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 HABP2Q14520 560 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 RGNQ15493 299 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 UGT2A3Q6UWM9 527 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 ENPP6Q6UWR7 440 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 BPHLQ86WA6 291 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 WDR20Q8TBZ3 569 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 FBXW5Q969U6 566 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 LMF2Q9BU23 707 aaKnown RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 OR51B6Q9H340 312 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 GAREM1Q9H706 876 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 SRA1Q9HD15 236 aaKnown RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 CUTCQ9NTM9 273 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 SEC14L4Q9UDX3 406 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 TCRBV5S1A1TA0A578 114 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 CD300LBA8K4G0 201 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 ZNF891A8MT65 544 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 XPNPEP2O43895 674 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 NPRL3Q12980 569 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 CEACAM7Q14002 265 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 MRPL58Q14197 206 aaKnown RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 COQ5Q5HYK3 327 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 C9orf152Q5JTZ5 239 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 KCTD11Q693B1 232 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 NIPAL3Q6P499 406 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 NAGSQ8N159 534 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 KHSRPQ92945 711 aaKnown RBP eCLIP8.2□□□□□ -1.14e-7■■□□□ 12.3
CTNND1-232ENST00000532649 RSPRY1Q96DX4 576 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 BSCL2Q96G97 398 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 SECISBP2Q96T21 854 aaKnown RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 CCM2LQ9NUG4 571 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 UBQLN2Q9UHD9 624 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 YARS2Q9Y2Z4 477 aaKnown RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 A0A1B0GV50 99 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 DLGAP1O14490 977 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 CASC3O15234 703 aaKnown RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 RGS9O75916 674 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 LCATP04180 440 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 EIF2DP41214 584 aaKnown RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 NAA10P41227 235 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 ZNF169Q14929 603 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 UGT8Q16880 541 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 SFT2D3Q587I9 215 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 KCNIP4Q6PIL6 250 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 TMEM205Q6UW68 189 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 ADAMTSL4Q6UY14 1074 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 MAMDC2Q7Z304 686 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 LKAAEAR1Q8TD35 194 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 HCAR1Q9BXC0 346 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 SEMA6CQ9H3T2 930 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 RREB1Q92766 1687 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 CENPBD1B2RD01 187 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 PNMTP11086 282 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 GDF1P27539 372 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 PTGER1P34995 402 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 TPMTP51580 245 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 KCNAB2Q13303 367 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 KRBOX4Q5JUW0 171 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 TMPRSS12Q86WS5 348 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 KIF18BQ86Y91 864 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 MARVELD2Q8N4S9 558 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 CNN2Q99439 309 aaKnown RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 OBP2BQ9NPH6 170 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 TMEM45AQ9NWC5 275 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 KIAA1551Q9HCM1 1747 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 BOLA2-SMG1P6H3BVE0 249 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 LINC01565O15544 149 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 HTRA2O43464 458 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 GGT1P19440 569 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 CRHBPP24387 322 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 GRPRP30550 384 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 PITPNBP48739 271 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 PRDX1Q06830 199 aaKnown RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 OR4K15Q8NH41 348 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 SLC2A12Q8TD20 617 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 ATOH8Q96SQ7 321 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 RBM24Q9BX46 236 aaKnown RBP8.2□□□□□ -1.1
CTNND1-232ENST00000532649 DCSTAMPQ9H295 470 aa8.2□□□□□ -1.1
CTNND1-232ENST00000532649 LAMB2P55268 1798 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 TEX51A0A1B0GUA7 166 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 PPP6CO00743 305 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 UGT2B7P16662 529 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 RPL11P62913 178 aaKnown RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SEMA3BQ13214 749 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 CFAP77Q6ZQR2 320 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 RNF175Q8N4F7 328 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 OR13H1Q8NG92 308 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 BEX2Q9BXY8 128 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 ULBP3Q9BZM4 244 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 BEX1Q9HBH7 125 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SDR39U1Q9NRG7 319 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SSC5DA1L4H1 1573 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 ANTXRLA6NF34 631 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 H7C1Q1 480 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 RNASET2O00584 256 aaKnown RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SNAP29O95721 258 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 TNFRSF1BP20333 461 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 CD34P28906 385 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms