RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 BICRALQ6AI39 1079 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF324BQ6AW86 544 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 ANKRD26P1Q6NSI1 321 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 GFRALQ6UXV0 394 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 TMEM64Q6YI46 380 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 MSANTD1Q6ZTZ1 278 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 DND1Q8IYX4 353 aaKnown RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 LIX1Q8N485 282 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 CPSF7Q8N684 471 aaKnown RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF441Q8N8Z8 693 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF540Q8NDQ6 660 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 C17orf47Q8NEP4 570 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR5M3Q8NGP4 307 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 CLHC1Q8NHS4 586 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 C16orf52Q8NHV5 167 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 RFWD2Q8NHY2 731 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 RAB3IL1Q8TBN0 382 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF675Q8TD23 568 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 KAT2AQ92830 837 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 PPCDCQ96CD2 204 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 CTHRC1Q96CG8 243 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 MTERF3Q96E29 417 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 SPACA9Q96E40 222 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 ATP6V1G3Q96LB4 118 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 PPP1R36Q96LQ0 422 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 C3orf30Q96M34 536 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 AMDHD1Q96NU7 426 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 SORT1Q99523 831 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 C1orf50Q9BV19 199 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 NUF2Q9BZD4 464 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 KLHL4Q9C0H6 718 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 THAP1Q9NVV9 213 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 JKAMPQ9P055 326 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 SH3BP4Q9P0V3 963 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 SEC14L3Q9UDX4 400 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 HAO1Q9UJM8 370 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 NPIPA1Q9UND3 350 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 LIPT1Q9Y234 373 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 EIF3LQ9Y262 564 aaKnown RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 POMT1Q9Y6A1 747 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 BOD1L1Q8NFC6 3051 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 TRAV34A0A0B4J273 112 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 PRSS29PA6NIE9 313 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 SH2D7A6NKC9 451 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 G3V3Y1 287 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 TP53I11O14683 189 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 TFECO14948 347 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 ACOX3O15254 700 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 TBX19O60806 448 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 SNNO75324 88 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 AGFG2O95081 481 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 ABCB1P08183 1280 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 CCDC159P0C7I6 412 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 CCL3P10147 92 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 G6PDP11413 515 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 GYPEP15421 78 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 NAGAP17050 411 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 LBPP18428 481 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 PRPS1L1P21108 318 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 CNR1P21554 472 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 DRD5P21918 477 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 PIGAP37287 484 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 RFC3P40938 356 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 MC3RP41968 323 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 PPICP45877 212 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 EMDP50402 254 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 TDGF1P3P51864 188 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 KCNK10P57789 538 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 KCNJ2P63252 427 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 RPP38P78345 283 aaKnown RBP5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 PLGLB1Q02325 96 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 MVKQ03426 396 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 EMX2Q04743 252 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 RBPJQ06330 500 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 PLCXD2Q0VAA5 305 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 HSPB3Q12988 150 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 DUSP8Q13202 625 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 CAMK2DQ13557 499 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 PDE7AQ13946 482 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 PTGR1Q14914 329 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 TTMPQ5BVD1 217 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 CPTPQ5TA50 214 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 PRAMEF20Q5VT98 475 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLC22A10Q63ZE4 541 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 VASNQ6EMK4 673 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 ABLIM2Q6H8Q1 611 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 TMEM107Q6UX40 140 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 SEM1Q6ZVN7 128 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 RRM2BQ7LG56 351 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF551Q7Z340 670 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 ADCK1Q86TW2 530 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 TUSC5Q8IXB3 177 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 PRR22Q8IZ63 422 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR2L13Q8N349 312 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZFP62Q8NB50 900 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 NUP43Q8NFH3 380 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR2M7Q8NG81 312 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR7G2Q8NG99 324 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR10G3Q8NGC4 313 aa5.29□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZFP28Q8NHY6 868 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms