RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 NPRL3Q12980 569 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 TRAM2Q15035 370 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 ZSWIM7Q19AV6 140 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 TMEM154Q6P9G4 183 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 GRAMD2AQ8IUY3 354 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 C8orf59Q8N0T1 100 aaPredicted RBP13.22□□□□□ -0.29
TTC39A-216ENST00000530004 ZNF441Q8N8Z8 693 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 C17orf47Q8NEP4 570 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 SLC38A4Q969I6 547 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 SLC41A3Q96GZ6 507 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 ADOQ96SZ5 270 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 GABARAPL3Q9BY60 117 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 HOXD1Q9GZZ0 328 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 EVA1AQ9H8M9 152 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 LIN28AQ9H9Z2 209 aaKnown RBP13.22□□□□□ -0.29
TTC39A-216ENST00000530004 ATP13A2Q9NQ11 1180 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 UBQLN4Q9NRR5 601 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 DNAJB12Q9NXW2 375 aaKnown RBP13.22□□□□□ -0.29
TTC39A-216ENST00000530004 TESQ9UGI8 421 aaKnown RBP13.22□□□□□ -0.29
TTC39A-216ENST00000530004 SCOCQ9UIL1 159 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 MGAT4BQ9UQ53 548 aa13.22□□□□□ -0.29
TTC39A-216ENST00000530004 TRBV11-1A0A0K0K1C0 115 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 ARGFXA6NJG6 315 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 K7ENP7 123 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 ABCB7O75027 752 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 REM1O75628 298 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 UTS2O95399 124 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 ADAP00813 363 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 THY1P04216 161 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 SERPINA7P05543 415 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 HPGDP15428 266 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 HTR2AP28223 471 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 ABCD3P28288 659 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 KRT20P35900 424 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 CLK3P49761 638 aaKnown RBP13.21□□□□□ -0.29
TTC39A-216ENST00000530004 RRADP55042 308 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 UCNP55089 124 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 FOXK2Q01167 660 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 AIMP2Q13155 320 aaKnown RBP13.21□□□□□ -0.29
TTC39A-216ENST00000530004 KEAP1Q14145 624 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 OR1Q1Q15612 314 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 ZNF691Q5VV52 312 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 INO80CQ6PI98 192 aaPredicted RBP13.21□□□□□ -0.29
TTC39A-216ENST00000530004 GDF7Q7Z4P5 450 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 CMIPQ8IY22 773 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 ZNF527Q8NB42 609 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 CLEC1AQ8NC01 280 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 OR4K5Q8NGD3 323 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 OR8K3Q8NH51 312 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 ARSGQ96EG1 525 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 HSPBAP1Q96EW2 488 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 POLR2J2Q9GZM3 115 aaKnown RBP13.21□□□□□ -0.29
TTC39A-216ENST00000530004 POLR2J3Q9H1A7 115 aaKnown RBP13.21□□□□□ -0.29
TTC39A-216ENST00000530004 ANKRD19PQ9H560 264 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 CPNE5Q9HCH3 593 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 FRYQ5TBA9 3013 aa13.21□□□□□ -0.29
TTC39A-216ENST00000530004 A0A087WUU8 490 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 SCDO00767 359 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 TSPAN2O60636 221 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 FMO6PO60774 539 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 UGT2B15P54855 530 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 TMPRSS3P57727 454 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 IL18R1Q13478 541 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 BLMHQ13867 455 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 KLHL26Q53HC5 615 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 DESI1Q6ICB0 168 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 PGBD2Q6P3X8 592 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 TTC33Q6PID6 262 aaPredicted RBP13.2□□□□□ -0.3
TTC39A-216ENST00000530004 THAP5Q7Z6K1 395 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 SLC34A3Q8N130 599 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 ZNF786Q8N393 782 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 LINC00471Q8N535 108 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 OIT3Q8WWZ8 545 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 TP53INP1Q96A56 240 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 OMA1Q96E52 524 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 ZNF559Q9BR84 538 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 ING2Q9H160 280 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 SLC7A7Q9UM01 511 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 MYRFQ9Y2G1 1151 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 IGF2RP11717 2491 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 TRAPPC13A5PLN9 417 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 ICOSLGO75144 302 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 NTN1O95631 604 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 CSTAP01040 98 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 TBXA2RP21731 343 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 LSM11P83369 360 aaKnown RBP eCLIP13.2□□□□□ -0.3
TTC39A-216ENST00000530004 CHAF1BQ13112 559 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 RAPSNQ13702 412 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 DEFB109BQ30KR1 87 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 NDUFAF6Q330K2 333 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 KLHL17Q6TDP4 642 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 ZNF730Q6ZMV8 503 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 C16orf47Q6ZP98 133 aaPredicted RBP13.2□□□□□ -0.3
TTC39A-216ENST00000530004 ZNF550Q7Z398 422 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 NKAIN4Q8IVV8 208 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 PARP8Q8N3A8 854 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 GATSQ8NAP1 163 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 NUBPLQ8TB37 319 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 THAP3Q8WTV1 239 aaPredicted RBP13.2□□□□□ -0.3
TTC39A-216ENST00000530004 SLC35B4Q969S0 331 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms