RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ZNF629Q9UEG4 869 aaPredicted RBP9.89□□□□□ -0.83
NEDD8-204ENST00000526430 MED12LQ86YW9 2145 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 CENPVL1A0A0U1RR11 272 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 ANKRD33BA6NCL7 494 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 NDUFAB1O14561 156 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 MRASO14807 208 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 ANGPT2O15123 496 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 REM1O75628 298 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 GLSO94925 669 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-204ENST00000526430 KCNH1O95259 989 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 GUSBP08236 651 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 FPR1P21462 350 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 SLC6A2P23975 617 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 CASP3P42574 277 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 PLAURQ03405 335 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 RUNX1T1Q06455 604 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 KRT72Q14CN4 511 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 SYPL1Q16563 259 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.88□□□□□ -0.83
NEDD8-204ENST00000526430 ARHGAP11BQ3KRB8 267 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 KRTAP24-1Q3LI83 254 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 SPDYE7PQ495Y7 208 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 RABL3Q5HYI8 236 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 WLSQ5T9L3 541 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 TNFAIP8L2Q6P589 184 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-204ENST00000526430 TMEM81Q6P7N7 255 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 POMZP3Q6PJE2 187 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 C6orf89Q6UWU4 347 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 RTL4Q6ZR62 310 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 SZRD1Q7Z422 152 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 DHDDSQ86SQ9 333 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 CALHM3Q86XJ0 350 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 PTOV1Q86YD1 416 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 GPALPP1Q8IXQ4 340 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 TAGAPQ8N103 731 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 FAM109AQ8N4B1 249 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 ANKFN1Q8N957 763 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 GOLM1Q8NBJ4 401 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 PSD4Q8NDX1 1056 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 OR2M7Q8NG81 312 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 LINC01560Q8TB33 94 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 ADAMTS15Q8TE58 950 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 XAGE5Q8WWM1 108 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 EFHD2Q96C19 240 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-204ENST00000526430 PERPQ96FX8 193 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 SGCZQ96LD1 299 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 DACH2Q96NX9 599 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 LRRC37BQ96QE4 947 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 ADOQ96SZ5 270 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 KLHDC3Q9BQ90 382 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 ANGPTL4Q9BY76 406 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 TTTY12Q9BZ98 90 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 KAT8Q9H7Z6 458 aaKnown RBP9.88□□□□□ -0.83
NEDD8-204ENST00000526430 IL1RL2Q9HB29 575 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 Q9N2J8 555 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 TIMMDC1Q9NPL8 285 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 RYDENQ9NUL5 291 aaKnown RBP9.88□□□□□ -0.83
NEDD8-204ENST00000526430 MRGBPQ9NV56 204 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 CMTM6Q9NX76 183 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 ACAD8Q9UKU7 415 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 FAF1Q9UNN5 650 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-204ENST00000526430 USP22Q9UPT9 525 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 LIPGQ9Y5X9 500 aa9.88□□□□□ -0.83
NEDD8-204ENST00000526430 C2orf72A6NCS6 295 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 FAM166BA8MTA8 275 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 BBIP1A8MTZ0 92 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 G3V3Y1 287 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 TLX2O43763 284 aaPredicted RBP9.87□□□□□ -0.83
NEDD8-204ENST00000526430 ICOSLGO75144 302 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 DCTN3O75935 186 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 ANP32DO95626 131 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 KRT75O95678 551 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 NPPAP01160 153 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 CHRM4P08173 479 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 CNR1P21554 472 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 CEACAM8P31997 349 aaPredicted RBP9.87□□□□□ -0.83
NEDD8-204ENST00000526430 CHI3L1P36222 383 aaPredicted RBP9.87□□□□□ -0.83
NEDD8-204ENST00000526430 CPOXP36551 454 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 MTPNP58546 118 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 POU6F2P78424 691 aaPredicted RBP9.87□□□□□ -0.83
NEDD8-204ENST00000526430 PLGLB1Q02325 96 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 PLCXD2Q0VAA5 305 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 STX5Q13190 355 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 NFYCQ13952 458 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 POU4F3Q15319 338 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 MAPK14Q16539 360 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 TRMT5Q32P41 509 aaKnown RBP9.87□□□□□ -0.83
NEDD8-204ENST00000526430 GRAMD1BQ3KR37 738 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 DCST2Q5T1A1 773 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 SLC22A10Q63ZE4 541 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 TYW3Q6IPR3 259 aaKnown RBP9.87□□□□□ -0.83
NEDD8-204ENST00000526430 BHLHB9Q6PI77 547 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 FRRS1Q6ZNA5 592 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 SEM1Q6ZVN7 128 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 NET1Q7Z628 596 aaPredicted RBP9.87□□□□□ -0.83
NEDD8-204ENST00000526430 SLC15A3Q8IY34 581 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 TRIML2Q8N7C3 387 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 NAXEQ8NCW5 288 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 SLC38A5Q8WUX1 472 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 ZNF524Q96C55 264 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms