RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CCL11P51671 97 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 ATXN3P54252 364 aaPredicted RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 MTTPP55157 894 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 SLC26A5P58743 744 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 STARD6P59095 220 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 SRYQ05066 204 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 PDIA5Q14554 519 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 WDR43Q15061 677 aaKnown RBP eCLIP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 PDK1Q15118 436 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 INAQ16352 499 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 HFEQ30201 348 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 C5orf47Q569G3 176 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 CMPK2Q5EBM0 449 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 SCYL2Q6P3W7 929 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 PLBD1Q6P4A8 553 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 AFTPHQ6ULP2 937 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 FAM159AQ6UWV7 190 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 DPY19L2P2Q6ZN68 376 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 FAM43BQ6ZT52 329 aaPredicted RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 PAQR9Q6ZVX9 377 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 LRRC70Q7Z2Q7 622 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 BNIPLQ7Z465 357 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 LCA5Q86VQ0 697 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 MISPQ8IVT2 679 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 CNNM3Q8NE01 707 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 NEK11Q8NG66 645 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 OR4F17Q8NGA8 305 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 RNASE8Q8TDE3 154 aaKnown RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 GIPC3Q8TF64 312 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 TMEM37Q8WXS4 190 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 CHCHD10Q8WYQ3 142 aaPredicted RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 PHYHIPQ92561 330 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 FAM46BQ96A09 425 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 TMEM45BQ96B21 275 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 TMEM186Q96B77 213 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 SDSLQ96GA7 329 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 EPSTI1Q96J88 318 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 GPR137Q96N19 417 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 OR4F4Q96R69 305 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 MYCBPQ99417 103 aaPredicted RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 CBWD1Q9BRT8 395 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 PELOQ9BRX2 385 aaKnown RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 NDUFAF3Q9BU61 184 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 NTMT1Q9BV86 223 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 FICDQ9BVA6 458 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 ACPTQ9BZG2 426 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 DPH5Q9H2P9 285 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 RWDD1Q9H446 243 aaPredicted RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 KAT8Q9H7Z6 458 aaKnown RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 COG4Q9H9E3 785 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 ROPN1Q9HAT0 212 aaPredicted RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 VAT1LQ9HCJ6 419 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 DDX28Q9NUL7 540 aaKnown RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 RBM28Q9NW13 759 aaKnown RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 NDUFA13Q9P0J0 144 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 ACTR3BQ9P1U1 418 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 ANKMY1Q9P2S6 941 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 DNPEPQ9ULA0 475 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 FZR1Q9UM11 496 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 AURKCQ9UQB9 309 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 CHMP2BQ9UQN3 213 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 FKBP7Q9Y680 259 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 MAD1L1Q9Y6D9 718 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 TEX264Q9Y6I9 313 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.09□□□□□ -2.24
ECHDC1-219ENST00000526299 GPRASP1Q5JY77 1395 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 GSAPA4D1B5 854 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 PSMB11A5LHX3 300 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 ERICH4A6NGS2 130 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 FBLL1A6NHQ2 334 aaKnown RBP1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 GJE1A6NN92 205 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 COLCA2A8K830 154 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 NPIPA2E9PIF3 369 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 PDLIM1O00151 329 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 NDC80O14777 642 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 MAPK13O15264 365 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 SPAG7O75391 227 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 SCGB2A1O75556 95 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 TOM1L1O75674 476 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 CXCL14O95715 111 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 TGFAP01135 160 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 BCKDHAP12694 445 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 UQCRBP14927 111 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 CD34P28906 385 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 PRDX2P32119 198 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 HPDP32754 393 aaPredicted RBP1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 RPL4P36578 427 aaKnown RBP1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 NPY2RP49146 381 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 NLRP11P59045 1033 aaKnown RBP1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 BDH1Q02338 343 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 HSF2Q03933 536 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 MESDQ14696 234 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 ACSF3Q4G176 576 aaPredicted RBP1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 AGKQ53H12 422 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 CYBRD1Q53TN4 286 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 TMEM41BQ5BJD5 291 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 DNAJC21Q5F1R6 531 aaKnown RBP1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 BEND6Q5SZJ8 279 aaPredicted RBP1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 PRR9Q5T870 116 aa1.08□□□□□ -2.24
ECHDC1-219ENST00000526299 RIPPLY2Q5TAB7 128 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms