RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 SNX3O60493 162 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 JAK2O60674 1132 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 STX11O75558 287 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 RPS6KA5O75582 802 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 CDC123O75794 336 aaPredicted RBP4.2□□□□□ -1.74
CD44-220ENST00000525688 ZNF189O75820 626 aaPredicted RBP4.2□□□□□ -1.74
CD44-220ENST00000525688 ERLIN2O94905 339 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 AHSA1O95433 338 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 ANXA4P09525 319 aaPredicted RBP4.2□□□□□ -1.74
CD44-220ENST00000525688 GP1BBP13224 206 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 EFNA1P20827 205 aaPredicted RBP4.2□□□□□ -1.74
CD44-220ENST00000525688 CCNOP22674 350 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 CA4P22748 312 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 ACKR3P25106 362 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 OTX1P32242 354 aaPredicted RBP4.2□□□□□ -1.74
CD44-220ENST00000525688 MAGEA9P43362 315 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 KCNJ3P48549 501 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 CDH6P55285 790 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 MAZP56270 477 aaKnown RBP4.2□□□□□ -1.74
CD44-220ENST00000525688 FKBP1BP68106 108 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 IRF8Q02556 426 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 PJVKQ0ZLH3 352 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 PHKG1Q16816 387 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 SGSM1Q2NKQ1 1148 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 DEFB115Q30KQ5 88 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 ACCSLQ4AC99 568 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 GPR157Q5UAW9 335 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 FKBP1CQ5VVH2 108 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 SNRNP48Q6IEG0 339 aaKnown RBP4.2□□□□□ -1.74
CD44-220ENST00000525688 SCYL2Q6P3W7 929 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 SASS6Q6UVJ0 657 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 SSX9Q7RTT3 188 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 ANKRD33Q7Z3H0 272 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 SCD5Q86SK9 330 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 AMIGO1Q86WK6 493 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 STX12Q86Y82 276 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 LSMEM2Q8N112 164 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 KBTBD3Q8NAB2 608 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 GATSQ8NAP1 163 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 POC1AQ8NBT0 407 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 ICA1LQ8NDH6 482 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 OR8J2Q8NGG1 315 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 CACNG8Q8WXS5 425 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 ARNTL2Q8WYA1 636 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 ELMO1Q92556 727 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 PHYHIPQ92561 330 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 TM4SF19Q96DZ7 209 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 ST6GAL2Q96JF0 529 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 GUCD1Q96NT3 240 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 ACCSQ96QU6 501 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 OMDQ99983 421 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 CENPKQ9BS16 269 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 PANK2Q9BZ23 570 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 PRRG3Q9BZD7 231 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 TRIM9Q9C026 710 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 POLR3FQ9H1D9 316 aaPredicted RBP4.2□□□□□ -1.74
CD44-220ENST00000525688 DEFB129Q9H1M3 183 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 ACTL8Q9H568 366 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 RANBP3Q9H6Z4 567 aaPredicted RBP4.2□□□□□ -1.74
CD44-220ENST00000525688 ZNF302Q9NR11 478 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 SDR39U1Q9NRG7 319 aaPredicted RBP4.2□□□□□ -1.74
CD44-220ENST00000525688 FGF21Q9NSA1 209 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 C20orf96Q9NUD7 363 aaPredicted RBP4.2□□□□□ -1.74
CD44-220ENST00000525688 ADAM22Q9P0K1 906 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 PIPOXQ9P0Z9 390 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 P2RX2Q9UBL9 471 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 ADAM28Q9UKQ2 775 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 VANGL2Q9ULK5 521 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 CFL2Q9Y281 166 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 KLK4Q9Y5K2 254 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 PUS1Q9Y606 427 aaKnown RBP eCLIP4.2□□□□□ -1.74
CD44-220ENST00000525688 TRIP12Q14669 1992 aaPredicted RBP4.2□□□□□ -1.74
CD44-220ENST00000525688 ZMYM6O95789 1325 aa4.2□□□□□ -1.74
CD44-220ENST00000525688 HTTP42858 3142 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 SSC5DA1L4H1 1573 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 AKAP11Q9UKA4 1901 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 MYH13Q9UKX3 1938 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 ECM29Q5VYK3 1845 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 RFX7Q2KHR2 1363 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 LOC105371242A0A075B767 164 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 LOC101059948A0A1B0GTJ6 334 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 GSTTP1A0A1W2PQM5 241 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 RNF222A6NCQ9 220 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 WASHC1A8K0Z3 465 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 GOLGA8MH3BSY2 632 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 NBR2O15453 112 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 ZSCAN12O43309 604 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 TIMM8AO60220 97 aaPredicted RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 PDE5AO76074 875 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 OR2F2O95006 317 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 TSPAN12O95859 305 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 PGK1P00558 417 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 ERCC1P07992 297 aaPredicted RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 SP9P0CG40 484 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 IGHV4-38-2P0DP08 117 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 CETPP11597 493 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 LIFP15018 202 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 EZRP15311 586 aaKnown RBP4.19□□□□□ -1.74
CD44-220ENST00000525688 NQO2P16083 231 aa4.19□□□□□ -1.74
CD44-220ENST00000525688 GSTM3P21266 225 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms