RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 RPL38P63173 70 aaKnown RBP21.26■□□□□ 0.99
USP47-205ENST00000525257 PDE7AQ13946 482 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 PGGHGQ32M88 737 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 TMEM176BQ3YBM2 270 aaPredicted RBP21.26■□□□□ 0.99
USP47-205ENST00000525257 EXOSC6Q5RKV6 272 aaKnown RBP21.26■□□□□ 0.99
USP47-205ENST00000525257 ZCCHC12Q6PEW1 402 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 CBLN3Q6UW01 205 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 SEZ6L2Q6UXD5 910 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 BHLHA15Q7RTS1 189 aaPredicted RBP21.26■□□□□ 0.99
USP47-205ENST00000525257 PIWIL2Q8TC59 973 aaKnown RBP21.26■□□□□ 0.99
USP47-205ENST00000525257 CDS1Q92903 461 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 FAM120BQ96EK7 910 aaKnown RBP21.26■□□□□ 0.99
USP47-205ENST00000525257 COQ10BQ9H8M1 238 aa21.26■□□□□ 0.99
USP47-205ENST00000525257 ZCCHC3Q9NUD5 404 aaKnown RBP21.26■□□□□ 0.99
USP47-205ENST00000525257 GDF2Q9UK05 429 aaPredicted RBP21.26■□□□□ 0.99
USP47-205ENST00000525257 IGHV3-15A0A0B4J1V0 119 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 DPRXA6NFQ7 191 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 GJE1A6NN92 205 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 TLX2O43763 284 aaPredicted RBP21.25■□□□□ 0.99
USP47-205ENST00000525257 ITGADQ13349 1161 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 LASP1Q14847 261 aaKnown RBP21.25■□□□□ 0.99
USP47-205ENST00000525257 P2RY6Q15077 328 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 LRIG3Q6UXM1 1119 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 Q6ZSR9 355 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 MNS1Q8NEH6 495 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 ZFP90Q8TF47 636 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 HS6ST2Q96MM7 605 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 TRIM2Q9C040 744 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 GP6Q9HCN6 339 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 CARD8Q9Y2G2 431 aa21.25■□□□□ 0.99
USP47-205ENST00000525257 ZNF814B7Z6K7 855 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 PLIN3O60664 434 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 LYZL6O75951 148 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 HSPA4LO95757 839 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 HMGN2P05204 90 aaKnown RBP21.24■□□□□ 0.99
USP47-205ENST00000525257 ATP6V1C1P21283 382 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 ENPP1P22413 925 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 TOMM34Q15785 309 aaPredicted RBP21.24■□□□□ 0.99
USP47-205ENST00000525257 STK11Q15831 433 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 NDUFAF6Q330K2 333 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 RFTN2Q52LD8 501 aaPredicted RBP21.24■□□□□ 0.99
USP47-205ENST00000525257 PODNL1Q6PEZ8 512 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 MTERF4Q7Z6M4 381 aaKnown RBP21.24■□□□□ 0.99
USP47-205ENST00000525257 TDRPQ86YL5 185 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 CCDC63Q8NA47 563 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 TRAF4Q9BUZ4 470 aaPredicted RBP21.24■□□□□ 0.99
USP47-205ENST00000525257 C12orf65Q9H3J6 166 aaKnown RBP21.24■□□□□ 0.99
USP47-205ENST00000525257 ALG2Q9H553 416 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 CXorf36Q9H7Y0 433 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 DUSP22Q9NRW4 184 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 SIRT3Q9NTG7 399 aaPredicted RBP21.24■□□□□ 0.99
USP47-205ENST00000525257 OXSMQ9NWU1 459 aa21.24■□□□□ 0.99
USP47-205ENST00000525257 GPC6Q9Y625 555 aaPredicted RBP21.24■□□□□ 0.99
USP47-205ENST00000525257 AZIN1O14977 448 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 RAMP1O60894 148 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 FESP07332 822 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 THBS1P07996 1170 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 NEFHP12036 1026 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 P2RX1P51575 399 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 CCDC153Q494R4 210 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 GALNTL6Q49A17 601 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 DNM1P46Q6ZS02 220 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 HIPK1Q86Z02 1210 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 PHC2Q8IXK0 858 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 ZNF527Q8NB42 609 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 STACQ99469 402 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 PIGUQ9H490 435 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 TUBB1Q9H4B7 451 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 PRSS50Q9UI38 385 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 ICAM5Q9UMF0 924 aa21.23■□□□□ 0.99
USP47-205ENST00000525257 A0A1W2PNR3 127 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 KIF2AO00139 706 aaPredicted RBP21.22■□□□□ 0.99
USP47-205ENST00000525257 IFNA2P01563 188 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 CD8AP01732 235 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 LINC00032P0C843 101 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 PRKCAP17252 672 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 SLC7A1P30825 629 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 C21orf58P58505 322 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 KLHL26Q53HC5 615 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.22■□□□□ 0.99
USP47-205ENST00000525257 CDC73Q6P1J9 531 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 DNAJC14Q6Y2X3 702 aaPredicted RBP21.22■□□□□ 0.99
USP47-205ENST00000525257 Q6ZT83 130 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.22■□□□□ 0.99
USP47-205ENST00000525257 SLC43A2Q8N370 569 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 GPR119Q8TDV5 335 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 USB1Q9BQ65 265 aaKnown RBP21.22■□□□□ 0.99
USP47-205ENST00000525257 PSD2Q9BQI7 771 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 BARX1Q9HBU1 254 aaPredicted RBP21.22■□□□□ 0.99
USP47-205ENST00000525257 CISD1Q9NZ45 108 aaKnown RBP21.22■□□□□ 0.99
USP47-205ENST00000525257 KLHL9Q9P2J3 617 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 ING1Q9UK53 422 aaPredicted RBP21.22■□□□□ 0.99
USP47-205ENST00000525257 ACTL7BQ9Y614 415 aa21.22■□□□□ 0.99
USP47-205ENST00000525257 C9JVG2 144 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 H3BNH8 94 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 GTPBP1O00178 669 aaKnown RBP21.21■□□□□ 0.99
USP47-205ENST00000525257 LSM1O15116 133 aaKnown RBP21.21■□□□□ 0.99
USP47-205ENST00000525257 FAM153BP0C7A2 387 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 CPA3P15088 417 aa21.21■□□□□ 0.99
USP47-205ENST00000525257 PTNP21246 168 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms