RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TMEM81Q6P7N7 255 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 C16orf89Q6UX73 402 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 CYP2R1Q6VVX0 501 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 YRDCQ86U90 279 aaKnown RBP5.89□□□□□ -1.47
CD44-214ENST00000525211 GPALPP1Q8IXQ4 340 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 ZFP62Q8NB50 900 aaPredicted RBP5.89□□□□□ -1.47
CD44-214ENST00000525211 C11orf65Q8NCR3 313 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 HIPK4Q8NE63 616 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 BBS10Q8TAM1 723 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 PHOSPHO1Q8TCT1 267 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 WDR60Q8WVS4 1066 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 CCDC124Q96CT7 223 aaKnown RBP5.89□□□□□ -1.47
CD44-214ENST00000525211 DNAJA3Q96EY1 480 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 SGCZQ96LD1 299 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 KCTD14Q9BQ13 255 aaPredicted RBP5.89□□□□□ -1.47
CD44-214ENST00000525211 BTBD10Q9BSF8 475 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 DOHHQ9BU89 302 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 TTTY12Q9BZ98 90 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 C1orf21Q9H246 121 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 SLC6A15Q9H2J7 730 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 UBQLN3Q9H347 655 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 MTHFD2LQ9H903 347 aaPredicted RBP5.89□□□□□ -1.47
CD44-214ENST00000525211 SPAG4Q9NPE6 437 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 CTPS2Q9NRF8 586 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 SACM1LQ9NTJ5 587 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 MRGBPQ9NV56 204 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 EXD2Q9NVH0 621 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 ASF1BQ9NVP2 202 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 KLRF1Q9NZS2 232 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 ICAM5Q9UMF0 924 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 LIPT1Q9Y234 373 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 DTNAQ9Y4J8 743 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 WIF1Q9Y5W5 379 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 V9GYQ6 96 aa5.89□□□□□ -1.47
CD44-214ENST00000525211 SPTA1P02549 2419 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 IGLV3-32A0A0A0MS00 114 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 C15orf38-AP3S2A0A0A6YYH1 394 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 A0A1W2PQD3 144 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 CDHR4A6H8M9 788 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 NPIPA5E9PKD4 350 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 J3KTA2 159 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 GYG2O15488 501 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 HCRTR2O43614 444 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 DPM1O60762 260 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 CYP7B1O75881 506 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 AK1P00568 194 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 SERPINA1P01009 418 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 MT-ND1P03886 318 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 GUSBP08236 651 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 NID1P14543 1247 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 ETS2P15036 469 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 RYKP34925 604 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 KRT20P35900 424 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 CASRP41180 1078 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 MAGEA8P43361 318 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 YAP1P46937 504 aaKnown RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 OR1E2P47887 323 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 STARP49675 285 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 TDGF1P3P51864 188 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 CRISP3P54108 245 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 CLDN15P56746 228 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 PPIAP62937 165 aaKnown RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 AP2B1P63010 937 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 KCNJ10P78508 379 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 RBBP4Q09028 425 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 FOXD4Q12950 439 aaPredicted RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 NRF1Q16656 503 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 LRRC23Q53EV4 343 aaPredicted RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 CYBRD1Q53TN4 286 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 ZNF311Q5JNZ3 666 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 WIPI1Q5MNZ9 446 aaPredicted RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 SAMD4BQ5PRF9 694 aaKnown RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 SLC30A6Q6NXT4 461 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 DHRS4L2Q6PKH6 230 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 WDR88Q6ZMY6 472 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 NCCRP1Q6ZVX7 275 aaPredicted RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 TRILQ7L0X0 811 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 ARPINQ7Z6K5 226 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 PLCZ1Q86YW0 608 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 ULK2Q8IYT8 1036 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 ZNF843Q8N446 348 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 FAM83FQ8NEG4 500 aaPredicted RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 OR6T1Q8NGN1 323 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 VANGL1Q8TAA9 524 aaPredicted RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 GPR119Q8TDV5 335 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 PNPLA2Q96AD5 504 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 SLCO4A1Q96BD0 722 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 TMCO6Q96DC7 493 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 TMEM41AQ96HV5 264 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 C5orf34Q96MH7 638 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 SECISBP2Q96T21 854 aaKnown RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 ARHGDIGQ99819 225 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 FAM173AQ9BQD7 235 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 G6PC3Q9BUM1 346 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 SPATA9Q9BWV2 254 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 TBL1XR1Q9BZK7 514 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 LRMDAQ9H2I8 198 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 RAD21L1Q9H4I0 556 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 ZNF703Q9H7S9 590 aaPredicted RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 ZFP64Q9NPA5 681 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms