RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 DENND2DQ9H6A0 471 aaPredicted RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 LRRC19Q9H756 370 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 ASB8Q9H765 288 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 PPCSQ9HAB8 311 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 FANCFQ9NPI8 374 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 SDR39U1Q9NRG7 319 aaPredicted RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.32□□□□□ -2.2
CD44-212ENST00000524922 PANK4Q9NVE7 773 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 DDIT4Q9NX09 232 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 ZNF226Q9NYT6 803 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 NPAP1Q9NZP6 1156 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 LUZP4Q9P127 313 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 LHX3Q9UBR4 397 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 FBXL17Q9UF56 701 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 FETUBQ9UGM5 382 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 GNPTGQ9UJJ9 305 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 PTBP2Q9UKA9 531 aaKnown RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 PLEKHA6Q9Y2H5 1048 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 KLF13Q9Y2Y9 288 aaPredicted RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 ANGPTL3Q9Y5C1 460 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 SNX8Q9Y5X2 465 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 COLEC10Q9Y6Z7 277 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 FREM1Q5H8C1 2179 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 DNAJC13O75165 2243 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 COL7A1Q02388 2944 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 ABCA13Q86UQ4 5058 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 MYH11P35749 1972 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 A0A0J9YYE9 177 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 PRSS51A0A1B0GVH4 220 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 A0A1W2PN81 502 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 GSAPA4D1B5 854 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 ARHGAP42A6NI28 874 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 AGAP14A8MT82 685 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 ZNF487B1APH4 448 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 KLLNB2CW77 178 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 H0YIG0 161 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 K7ERQ8 282 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 M0QYV0 167 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 GAPDHSO14556 408 aaPredicted RBP1.31□□□□□ -2.2
CD44-212ENST00000524922 KLF11O14901 512 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 CASC3O15234 703 aaKnown RBP1.31□□□□□ -2.2
CD44-212ENST00000524922 OGG1O15527 345 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 ZNF749O43361 778 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 ZNF354AO60765 605 aaPredicted RBP1.31□□□□□ -2.2
CD44-212ENST00000524922 DNAJB6O75190 326 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 PRKRAO75569 313 aaKnown RBP1.31□□□□□ -2.2
CD44-212ENST00000524922 KRTAP5-8O75690 187 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 OR2B3O76000 313 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 GLSO94925 669 aaPredicted RBP1.31□□□□□ -2.2
CD44-212ENST00000524922 LETM1O95202 739 aaPredicted RBP1.31□□□□□ -2.2
CD44-212ENST00000524922 PGLSO95336 258 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 ADCY5O95622 1261 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 EPPINO95925 133 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 EPOP01588 193 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 IGHV3-13P01766 116 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 TRBC1P01850 177 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 SLC4A1P02730 911 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 PCCBP05166 539 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 H1F0P07305 194 aaKnown RBP1.31□□□□□ -2.2
CD44-212ENST00000524922 KRT13P13646 458 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 FOLR2P14207 255 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 ZNF7P17097 686 aaPredicted RBP1.31□□□□□ -2.2
CD44-212ENST00000524922 DESP17661 470 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 HLA-DPA1P20036 260 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 LHCGRP22888 699 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 CRYGSP22914 178 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 CXCR2P25025 360 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 AK4P27144 223 aaPredicted RBP1.31□□□□□ -2.2
CD44-212ENST00000524922 GCH1P30793 250 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 SHMT2P34897 504 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 CA5AP35218 305 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 SERPINB6P35237 376 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 BSGP35613 385 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 HMGCLP35914 325 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 CHRNA7P36544 502 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 GPR1P46091 355 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 RFX3P48380 749 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 CYB561P49447 251 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 KHKP50053 298 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 CDH6P55285 790 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 RPS18P62269 152 aaKnown RBP1.31□□□□□ -2.2
CD44-212ENST00000524922 SKP1P63208 163 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 MS4A2Q01362 244 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 LRRC63Q05C16 580 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 PAX8Q06710 450 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 IL10RBQ08334 325 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 MORF4L2Q15014 288 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 PDK1Q15118 436 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 RBBP7Q16576 425 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 ASTE1Q2TB18 679 aaPredicted RBP1.31□□□□□ -2.2
CD44-212ENST00000524922 RNF212Q495C1 297 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 ALFQ53S48 1182 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 ACER2Q5QJU3 275 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 LDLRAP1Q5SW96 308 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 GCNT6Q5T4J0 391 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 SYPL2Q5VXT5 272 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 ARMC3Q5W041 872 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 KCTD16Q68DU8 428 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 TXNRD3NBQ6F5E7 133 aa1.31□□□□□ -2.2
CD44-212ENST00000524922 RAET1GQ6H3X3 334 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms