RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 TUSC5Q8IXB3 177 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 RIMKLAQ8IXN7 391 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 OR56A1Q8NGH5 318 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 GPR119Q8TDV5 335 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 ADAMTS15Q8TE58 950 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.74■□□□□ 0.273e-7■■■■□ 23.4
PTP4A3-206ENST00000524028 HOXD1Q9GZZ0 328 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 L2HGDHQ9H9P8 463 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 LGALS13Q9UHV8 139 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 ACTL7BQ9Y614 415 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 ROS1P08922 2347 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 FAM171A2A8MVW0 826 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 SKAP2O75563 359 aaPredicted RBP16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 GCM2O75603 506 aaPredicted RBP16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 NUDT14O95848 222 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 PRKCAP17252 672 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 DDX5P17844 614 aaKnown RBP16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 ELK4P28324 431 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 ADH6P28332 368 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 ATP12AP54707 1039 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 TMEM176BQ3YBM2 270 aaPredicted RBP16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 SPDYE7PQ495Y7 208 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 GTF2IRD2BQ6EKJ0 949 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 GTF2IRD2Q86UP8 949 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 HOMEZQ8IX15 550 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 GABRG1Q8N1C3 465 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 FNDC5Q8NAU1 212 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 ZNF527Q8NB42 609 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 OR5AK3PQ8NH89 298 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 CPNE4Q96A23 557 aaPredicted RBP16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 S100PBPQ96BU1 408 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 BDH2Q9BUT1 245 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 OR10A4Q9H209 315 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 COQ10BQ9H8M1 238 aa16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 FAF1Q9UNN5 650 aaPredicted RBP16.73■□□□□ 0.27
PTP4A3-206ENST00000524028 ESPNB1AK53 854 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 LYPLA1O75608 230 aaPredicted RBP16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 NUDT17P0C025 328 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 PAX1P15863 534 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 NR1H2P55055 460 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 SUMO3P55854 103 aaPredicted RBP16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 LSM12Q3MHD2 195 aaKnown RBP16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 ALKBH2Q6NS38 261 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 TFAP2EQ6VUC0 442 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 RIBC1Q8N443 379 aaPredicted RBP16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 ATP6V1C2Q8NEY4 427 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 OR5D16Q8NGK9 328 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 LILRB1Q8NHL6 650 aaPredicted RBP16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 RAB3IL1Q8TBN0 382 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 OR7D2Q96RA2 312 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 SERHL2Q9H4I8 314 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 FANCFQ9NPI8 374 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 ATAD3AQ9NVI7 634 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 KLHL13Q9P2N7 655 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 DTNAQ9Y4J8 743 aa16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 GPC6Q9Y625 555 aaPredicted RBP16.72■□□□□ 0.27
PTP4A3-206ENST00000524028 DNHD1Q96M86 4753 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 IGHV3-15A0A0B4J1V0 119 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 H3BNH8 94 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 GTPBP1O00178 669 aaKnown RBP16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 HS3ST1O14792 307 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 PRKD3O94806 890 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 PABPC4LP0CB38 370 aaKnown RBP16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 G6PDP11413 515 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 PRPS1L1P21108 318 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 ENPP1P22413 925 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 RPS26P62854 115 aaKnown RBP16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 HBA1P69905 142 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 RNPS1Q15287 305 aaKnown RBP16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 TMEM201Q5SNT2 666 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 FCRLAQ7L513 359 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 CLEC4FQ8N1N0 589 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 NATD1Q8N6N6 113 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 ZNF611Q8N823 705 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 RFWD2Q8NHY2 731 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 SFXN5Q8TD22 340 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 REXO5Q96IC2 774 aaKnown RBP16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 SDF2Q99470 211 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 DUSP26Q9BV47 211 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 BHLHE41Q9C0J9 482 aaPredicted RBP16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 TIGARQ9NQ88 270 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 ZNF701Q9NV72 531 aaPredicted RBP16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 KCNE5Q9UJ90 142 aa16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 ING1Q9UK53 422 aaPredicted RBP16.71■□□□□ 0.27
PTP4A3-206ENST00000524028 DSCAMO60469 2012 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 ZANQ9Y493 2812 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 A0A1W2PNR3 127 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 CFLARO15519 480 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 CNOT4O95628 575 aaKnown RBP16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 BPGMP07738 259 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 KRT16P08779 473 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 SERPINB5P36952 375 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 VSNL1P62760 191 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 SLC25A53Q5H9E4 307 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 OLIG3Q7RTU3 272 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 ZNF614Q8N883 585 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 STEAP2Q8NFT2 490 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 ZFP90Q8TF47 636 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 TMEM171Q8WVE6 324 aa16.7■□□□□ 0.26
PTP4A3-206ENST00000524028 AKAP1Q92667 903 aaKnown RBP eCLIP16.7■□□□□ 0.264e-7■□□□□ 8.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms