RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 BMFQ96LC9 184 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 NRSN2Q9GZP1 204 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 SLC39A1Q9NY26 324 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 METTL21EPA6NDL7 271 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 CSTBP04080 98 aaKnown RBP12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 RBMS1P29558 406 aaKnown RBP12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 PRPS1P60891 318 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF45Q02386 682 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 DGLUCYQ7Z3D6 616 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR14L1PQ8NHC6 308 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 GGHQ92820 318 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 PPP1R14BQ96C90 147 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 TMEM41AQ96HV5 264 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 ERVK13-1Q9NX77 482 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 KLHL21Q9UJP4 597 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 SH2B3Q9UQQ2 575 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 EFCAB7A8K855 629 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 FARS2O95363 451 aaKnown RBP12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 SYNGR4O95473 234 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 SLC35E2P0CK97 266 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 EIF4EBP2Q13542 120 aaPredicted RBP12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 ABHD17BQ5VST6 288 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF517Q6ZMY9 492 aaPredicted RBP12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 UBE2FQ969M7 185 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR5B2Q96R09 309 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 CTRCQ99895 268 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 A4GALTQ9NPC4 353 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 B4GALT7Q9UBV7 327 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 SPTBN2O15020 2390 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 CTNSO60931 367 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 TSFMP43897 325 aaKnown RBP12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 CXCR4P61073 352 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 DUSP5Q16690 384 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 SYNPOQ8N3V7 929 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR4F15Q8NGB8 312 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 NXPE2Q96DL1 559 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 FOLH1BQ9HBA9 442 aa12.19□□□□□ -0.46
PCDHGB1-201ENST00000523390 LOC100509620A0A075B734 347 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 MOSPD3O75425 235 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF43P17038 809 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 DRD3P35462 400 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 RIDAP52758 137 aaKnown RBP12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 TSPAN31Q12999 210 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 PDE7AQ13946 482 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 SCGB2B2Q4G0G5 96 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 ANKRD34AQ69YU3 496 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 SLCO4A1Q96BD0 722 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 PITX2Q99697 317 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 SLC17A4Q9Y2C5 497 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 GAPDHSO14556 408 aaPredicted RBP12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 RAD1O60671 282 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 CD22P20273 847 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 BSGP35613 385 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 SEC23BQ15437 767 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 MS4A15Q8N5U1 240 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 SENP5Q96HI0 755 aaPredicted RBP12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 LRRC3BQ96PB8 259 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 FUZQ9BT04 418 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 TCEAL2Q9H3H9 227 aaPredicted RBP12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 ACOT13Q9NPJ3 140 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 TESQ9UGI8 421 aaKnown RBP12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 MBD1Q9UIS9 605 aaPredicted RBP12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR2T1O43869 369 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 ELAVL4P26378 380 aaKnown RBP12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 S100GP29377 79 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF84P51523 738 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 CCR5P51681 352 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 SRYQ05066 204 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 HTR4Q13639 388 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR7A5Q15622 319 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 TSSK4Q6SA08 328 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 ARMC10Q8N2F6 343 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 ARSGQ96EG1 525 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF638Q14966 1978 aaKnown RBP12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 TSPAN11A1L157 253 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 FUOMA2VDF0 154 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 TMX2-CTNND1H3BSU7 103 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 FGF17O60258 216 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZFAND5O76080 213 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 F13BP05160 661 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 RAB15P59190 212 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 PAPD4Q6PIY7 484 aaKnown RBP12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 IL20RBQ6UXL0 311 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF782Q6ZMW2 699 aaPredicted RBP12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 MINDY2Q8NBR6 621 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 RPL3LQ92901 407 aaKnown RBP12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 FOXN4Q96NZ1 517 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 LMF2Q9BU23 707 aaKnown RBP12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 WASH6PQ9NQA3 447 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 ENPP5Q9UJA9 477 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 DHDHQ9UQ10 334 aa12.18□□□□□ -0.46
PCDHGB1-201ENST00000523390 A6NCN8 305 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF264O43296 627 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 RGS9O75916 674 aaPredicted RBP12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 MAGEA8P43361 318 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 C4orf46Q504U0 113 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR2G6Q5TZ20 316 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 RCBTB1Q8NDN9 531 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 SPRYD4Q8WW59 207 aaPredicted RBP12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 ULBP3Q9BZM4 244 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms