RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 HMGB1P1B2RPK0 211 aaPredicted RBP13.56□□□□□ -0.24
PCM1-218ENST00000523055 FAM47E-STBD1D6RA91 191 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 HCRTR2O43614 444 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 OPN1LWP04000 364 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 OR12D1P0DN82 309 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 LCN1P31025 176 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 GPR68Q15743 365 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 PLPPR5Q32ZL2 321 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 PDCD4Q53EL6 469 aaKnown RBP13.56□□□□□ -0.24
PCM1-218ENST00000523055 KLHL26Q53HC5 615 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 PDZK1Q5T2W1 519 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 EPGNQ6UW88 154 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 HMGN2P46Q86SG4 172 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 LSRQ86X29 649 aaPredicted RBP13.56□□□□□ -0.24
PCM1-218ENST00000523055 CXorf67Q86X51 503 aaPredicted RBP13.56□□□□□ -0.24
PCM1-218ENST00000523055 VPS37AQ8NEZ2 397 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 FAM222BQ8WU58 562 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 ZNF524Q96C55 264 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 ZNF845Q96IR2 970 aaPredicted RBP13.56□□□□□ -0.24
PCM1-218ENST00000523055 OR52E6Q96RD3 313 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 MED17Q9NVC6 651 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 BTNL2Q9UIR0 455 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 MKLN1Q9UL63 735 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 CARD8Q9Y2G2 431 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 FREM1Q5H8C1 2179 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 CCDC154A6NI56 674 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 DVL2O14641 736 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 TMIGD3P0DMS9 266 aaPredicted RBP13.56□□□□□ -0.24
PCM1-218ENST00000523055 PEPDP12955 493 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 IDO1P14902 403 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 PSMA4P25789 261 aaKnown RBP13.56□□□□□ -0.24
PCM1-218ENST00000523055 CHI3L1P36222 383 aaPredicted RBP13.56□□□□□ -0.24
PCM1-218ENST00000523055 ATP12AP54707 1039 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 SF3B4Q15427 424 aaKnown RBP eCLIP13.56□□□□□ -0.24
PCM1-218ENST00000523055 HEPHL1Q6MZM0 1159 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 C16orf62Q7Z3J2 963 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 GGNQ86UU5 652 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 RNF130Q86XS8 419 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 GRAMD2AQ8IUY3 354 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 GOLGA6L1Q8N7Z2 621 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 B4GALNT2Q8NHY0 566 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 POC1BQ8TC44 478 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 PNPT1Q8TCS8 783 aaKnown RBP13.56□□□□□ -0.24
PCM1-218ENST00000523055 MIPOL1Q8TD10 442 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 DYDC1Q8WWB3 177 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 XAGE5Q8WWM1 108 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 FIG4Q92562 907 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 INTS12Q96CB8 462 aaKnown RBP13.56□□□□□ -0.24
PCM1-218ENST00000523055 NEURL3Q96EH8 262 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 RNF145Q96MT1 663 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 PANX1Q96RD7 426 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 PIGQQ9BRB3 760 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 ZNF350Q9GZX5 532 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 TMEM185BQ9H7F4 350 aa13.56□□□□□ -0.24
PCM1-218ENST00000523055 SDR39U1Q9NRG7 319 aaPredicted RBP13.56□□□□□ -0.24
PCM1-218ENST00000523055 INTS9Q9NV88 658 aaKnown RBP13.56□□□□□ -0.24
PCM1-218ENST00000523055 FAM171A2A8MVW0 826 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 EEF1E1-BLOC1S5C9J1V9 151 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 UBDO15205 165 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 EEF1E1O43324 174 aaKnown RBP13.55□□□□□ -0.24
PCM1-218ENST00000523055 SLC22A3O75751 556 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 LINGO3P0C6S8 592 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 IL11P20809 199 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 UQCRC1P31930 480 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 ZNF41P51814 821 aaPredicted RBP13.55□□□□□ -0.24
PCM1-218ENST00000523055 NKX6-1P78426 367 aaPredicted RBP13.55□□□□□ -0.24
PCM1-218ENST00000523055 FOXF1Q12946 379 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 TOMM34Q15785 309 aaPredicted RBP13.55□□□□□ -0.24
PCM1-218ENST00000523055 BCL2A1Q16548 175 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 ARHGAP11BQ3KRB8 267 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 GTDC1Q4AE62 458 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 TIGD2Q4W5G0 525 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 COX20Q5RI15 118 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 SHEQ5VZ18 495 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 MISPQ8IVT2 679 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 ZNF527Q8NB42 609 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 UCN2Q96RP3 112 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 ZBTB18Q99592 522 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 PINK1Q9BXM7 581 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 ZNF629Q9UEG4 869 aaPredicted RBP13.55□□□□□ -0.24
PCM1-218ENST00000523055 ICAM5Q9UMF0 924 aa13.55□□□□□ -0.24
PCM1-218ENST00000523055 DUXAA6NLW8 204 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 INAFM1C9JVW0 142 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 HMGN4O00479 90 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 BCAS1O75363 584 aaPredicted RBP13.54□□□□□ -0.24
PCM1-218ENST00000523055 UGT2B17O75795 530 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 RCBTB2O95199 551 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 NUDT14O95848 222 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 CTSSP25774 331 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 SHC1P29353 583 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 PEX19P40855 299 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 KHKP50053 298 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 IDH3AP50213 366 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 ASCL1P50553 236 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 MAPK14Q16539 360 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 GSTA3Q16772 222 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 FBXL19-AS1Q494R0 122 aa13.54□□□□□ -0.24
PCM1-218ENST00000523055 GLYR1Q49A26 553 aaPredicted RBP13.54□□□□□ -0.24
PCM1-218ENST00000523055 TYW3Q6IPR3 259 aaKnown RBP13.54□□□□□ -0.24
PCM1-218ENST00000523055 ZNF621Q6ZSS3 439 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms