RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 MATN1P21941 496 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 HOXC12P31275 282 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 RNF144AP50876 292 aaPredicted RBP16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 NKX6-1P78426 367 aaPredicted RBP16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 ZNF844Q08AG5 666 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 SHEQ5VZ18 495 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 OR4F3Q6IEY1 312 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 C6orf120Q7Z4R8 191 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 TMCO5AQ8N6Q1 288 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 ZNF781Q8N8C0 355 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 WFDC11Q8NEX6 87 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 TOR1AIP2Q8NFQ8 470 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 OR5D16Q8NGK9 328 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 CPNE4Q96A23 557 aaPredicted RBP16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 ARL8AQ96BM9 186 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 SDF2Q99470 211 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 PIP5K1AQ99755 562 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 DPY30Q9C005 99 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 AKTIPQ9H8T0 292 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 UBTD1Q9HAC8 227 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 DLL4Q9NR61 685 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 PCNX3Q9H6A9 2034 aa16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 MAP1AP78559 2803 aaPredicted RBP16.51■□□□□ 0.23
TOP1MT-216ENST00000522121 ABCA4P78363 2273 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 SETD2Q9BYW2 2564 aaPredicted RBP16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 MTORP42345 2549 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 NPIPB9F8W1W9 429 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 RNASET2O00584 256 aaKnown RBP16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 ZNF264O43296 627 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 OIP5O43482 229 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 EIF4E2O60573 245 aaKnown RBP16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 SMPD2O60906 423 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 UBL4AP11441 157 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 RPL14P50914 215 aaKnown RBP16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 RNPS1Q15287 305 aaKnown RBP16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 ACKR1Q16570 336 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 ZNF239Q16600 458 aaKnown RBP16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 TMEM201Q5SNT2 666 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 STAC2Q6ZMT1 411 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 P3H2Q8IVL5 708 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 CLECL1Q8IZS7 167 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 VPS37AQ8NEZ2 397 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 OR5W2Q8NH69 310 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 RFWD2Q8NHY2 731 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 GPR119Q8TDV5 335 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 ROBO4Q8WZ75 1007 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 MRGPRX4Q96LA9 322 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 PARD6BQ9BYG5 372 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 NMUR2Q9GZQ4 415 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 CENPHQ9H3R5 247 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 C12orf49Q9H741 205 aa16.5■□□□□ 0.23
TOP1MT-216ENST00000522121 RNF103-CHMP3A0A140T963 221 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 STX11O75558 287 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 PRKCAP17252 672 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 AGTR1P30556 359 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 SLC1A6P48664 564 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 CCR4P51679 360 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 RPS26P62854 115 aaKnown RBP16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 CBFBQ13951 182 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 TMEM176BQ3YBM2 270 aaPredicted RBP16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 BEX5Q5H9J7 111 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 PDZK1Q5T2W1 519 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 ANXA8L1Q5VT79 327 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 CXorf67Q86X51 503 aaPredicted RBP16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 ATP6V1C2Q8NEY4 427 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 OR8J2Q8NGG1 315 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 OR4A15Q8NGL6 344 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 RNF128Q8TEB7 428 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 SLC35G5Q96KT7 338 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 MARK4Q96L34 752 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 ZNF395Q9H8N7 513 aaPredicted RBP16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 KCNK9Q9NPC2 374 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 EXD2Q9NVH0 621 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 GPR52Q9Y2T5 361 aa16.49■□□□□ 0.23
TOP1MT-216ENST00000522121 SERINC4A6NH21 518 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 EFNA2O43921 213 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 PRKD3O94806 890 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 AGR2O95994 175 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 SHC1P29353 583 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 SLC7A1P30825 629 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 SELENBP1Q13228 472 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 GPR68Q15743 365 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 TOMM34Q15785 309 aaPredicted RBP16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 NDUFAF6Q330K2 333 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 ARHGAP11BQ3KRB8 267 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 ATAD3BQ5T9A4 648 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 C20orf204Q6ZNR8 217 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 C22orf34Q6ZV56 151 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 C16orf62Q7Z3J2 963 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 LRRC75A-AS1Q8N1F1 130 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 ZFP90Q8TF47 636 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 ABHD3Q8WU67 409 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 ARSGQ96EG1 525 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 CCL19Q99731 98 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 OR10A4Q9H209 315 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 GP6Q9HCN6 339 aa16.48■□□□□ 0.23
TOP1MT-216ENST00000522121 NF1P21359 2839 aa16.47■□□□□ 0.23
TOP1MT-216ENST00000522121 PRSS51A0A1B0GVH4 220 aa16.47■□□□□ 0.23
TOP1MT-216ENST00000522121 CYP7B1O75881 506 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms