RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 SDR39U1Q9NRG7 319 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC9-211ENST00000521700 ARGLU1Q9NWB6 273 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC9-211ENST00000521700 ZIM2Q9NZV7 527 aa16.07■□□□□ 0.16
TRAPPC9-211ENST00000521700 POLQO75417 2590 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 A0A0J9YW62 118 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 A8MXE2 369 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 HMGN4O00479 90 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 ADAMDEC1O15204 470 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 ZNF264O43296 627 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 EFNA2O43921 213 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 EIF4E2O60573 245 aaKnown RBP16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 NUDT14O95848 222 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 IL6P05231 212 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 EIF1P41567 113 aaKnown RBP16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 KIR2DL2P43627 348 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 EIF1AXP47813 144 aaKnown RBP16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 KHKP50053 298 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 SUMO3P55854 103 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 FOXF1Q12946 379 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 MAPK14Q16539 360 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 TYW3Q6IPR3 259 aaKnown RBP16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 VWA1Q6PCB0 445 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 KIF18BQ86Y91 864 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 TRIML2Q8N7C3 387 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 OR10D3Q8NH80 312 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 FBXO27Q8NI29 283 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 RBM24Q9BX46 236 aaKnown RBP16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 SAP130Q9H0E3 1048 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 TMEM185BQ9H7F4 350 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 PACSIN3Q9UKS6 424 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 WDR45Q9Y484 360 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 CSMD2Q7Z408 3487 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 MPDZO75970 2070 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 HEATR5AQ86XA9 2040 aa16.06■□□□□ 0.16
TRAPPC9-211ENST00000521700 HMGB1P1B2RPK0 211 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 AQP8O94778 261 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 UBL4AP11441 157 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 ADH6P28332 368 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 SLC6A8P48029 635 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 BTLAQ7Z6A9 289 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 LILRA2Q8N149 483 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 GOLGA6L1Q8N7Z2 621 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 CNEP1R1Q8N9A8 125 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 OR9I1Q8NGQ6 314 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 OR5W2Q8NH69 310 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 OR2V1Q8NHB1 315 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 RFWD2Q8NHY2 731 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 ZG16BQ96DA0 208 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 ARSGQ96EG1 525 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 LAT2Q9GZY6 243 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 POLE3Q9NRF9 147 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 SLC6A13Q9NSD5 602 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 GALNT8Q9NY28 637 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 GPC6Q9Y625 555 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 TACC2O95359 2948 aa16.05■□□□□ 0.16
TRAPPC9-211ENST00000521700 ANKHD1Q8IWZ3 2542 aaKnown RBP16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 TUBAL3A6NHL2 446 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 RFXANKO14593 260 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 TNFSF11O14788 317 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 MSTNO14793 375 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 CXCL13O43927 109 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 KIAA0513O60268 411 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 CTAG2O75638 210 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 TGDSO95455 350 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 PRKCAP17252 672 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 ME2P23368 584 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 SHC1P29353 583 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 CPA2P48052 419 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 IDH3AP50213 366 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 POLR2JP52435 117 aaKnown RBP16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 PPP2R2AP63151 447 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 SIRPAP78324 504 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 SORDQ00796 357 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 CHRNEQ04844 493 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 GPAT3Q53EU6 434 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 COX20Q5RI15 118 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 FRRS1Q6ZNA5 592 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 ESPNLQ6ZVH7 1005 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 TMEM200AQ86VY9 491 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 MIER2Q8N344 545 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 TOR1AIP2Q8NFQ8 470 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 LINC01560Q8TB33 94 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 PNPT1Q8TCS8 783 aaKnown RBP16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 FAM222BQ8WU58 562 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 DYDC1Q8WWB3 177 aa16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 THUMPD3Q9BV44 507 aaKnown RBP16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 INTS9Q9NV88 658 aaKnown RBP16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 PAQR5Q9NXK6 330 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC9-211ENST00000521700 FAM221AA4D161 298 aa16.03■□□□□ 0.16
TRAPPC9-211ENST00000521700 DNAJA2O60884 412 aa16.03■□□□□ 0.16
TRAPPC9-211ENST00000521700 CYP7B1O75881 506 aa16.03■□□□□ 0.16
TRAPPC9-211ENST00000521700 SMNDC1O75940 238 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRAPPC9-211ENST00000521700 H6PDO95479 791 aa16.03■□□□□ 0.16
TRAPPC9-211ENST00000521700 NTN1O95631 604 aa16.03■□□□□ 0.16
TRAPPC9-211ENST00000521700 CSTAP01040 98 aa16.03■□□□□ 0.16
TRAPPC9-211ENST00000521700 ELK4P28324 431 aa16.03■□□□□ 0.16
TRAPPC9-211ENST00000521700 SFTPDP35247 375 aa16.03■□□□□ 0.16
TRAPPC9-211ENST00000521700 CCR4P51679 360 aa16.03■□□□□ 0.16
TRAPPC9-211ENST00000521700 SKP2Q13309 424 aa16.03■□□□□ 0.16
TRAPPC9-211ENST00000521700 FGFBP1Q14512 234 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms