RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 CSTF1Q05048 431 aaKnown RBP10.52□□□□□ -0.73
CLK4-206ENST00000520878 DUSP8Q13202 625 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 DSG2Q14126 1118 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 PRICKLE4Q2TBC4 344 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 FAM26EQ8N5C1 309 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 SDR9C7Q8NEX9 313 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 OR4Q3Q8NH05 313 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 SPRYD4Q8WW59 207 aaPredicted RBP10.52□□□□□ -0.73
CLK4-206ENST00000520878 NR4A3Q92570 626 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 ZMYND19Q96E35 227 aaPredicted RBP10.52□□□□□ -0.73
CLK4-206ENST00000520878 ZNF764Q96H86 408 aaPredicted RBP10.52□□□□□ -0.73
CLK4-206ENST00000520878 SARGQ9BW04 601 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 SLIRPQ9GZT3 109 aaKnown RBP10.52□□□□□ -0.73
CLK4-206ENST00000520878 OR10A5Q9H207 317 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 DDX28Q9NUL7 540 aaKnown RBP10.52□□□□□ -0.73
CLK4-206ENST00000520878 TEKT2Q9UIF3 430 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 ARRDC5A6NEK1 342 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 FABP12A6NFH5 140 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 PRAMEF2O60811 474 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 CTNSO60931 367 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 HLA-DQA2P01906 255 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 ZNF3P17036 446 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 CAPZBP47756 277 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 FOXL2P58012 376 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 C12orf73Q69YU5 71 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 Q7L0L9 218 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 RBM12BQ8IXT5 1001 aaKnown RBP10.52□□□□□ -0.73
CLK4-206ENST00000520878 FAM83FQ8NEG4 500 aaPredicted RBP10.52□□□□□ -0.73
CLK4-206ENST00000520878 SNX33Q8WV41 574 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 APOBEC4Q8WW27 367 aaKnown RBP10.52□□□□□ -0.73
CLK4-206ENST00000520878 SENP5Q96HI0 755 aaPredicted RBP10.52□□□□□ -0.73
CLK4-206ENST00000520878 ARHGDIGQ99819 225 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 BCL7BQ9BQE9 202 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 SLC30A2Q9BRI3 323 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 AHCTF1Q8WYP5 2266 aa10.52□□□□□ -0.73
CLK4-206ENST00000520878 FAM221BA6H8Z2 402 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 AKAP8O43823 692 aaKnown RBP10.51□□□□□ -0.73
CLK4-206ENST00000520878 HCN1O60741 890 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 CSF2P04141 144 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 HIST1H2ABP04908 130 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 HBQ1P09105 142 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 MAKP20794 623 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 SOX18P35713 384 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 CXCL12P48061 93 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 ARRB1P49407 418 aaPredicted RBP10.51□□□□□ -0.73
CLK4-206ENST00000520878 FBXW4P57775 412 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 RPS25P62851 125 aaKnown RBP10.51□□□□□ -0.73
CLK4-206ENST00000520878 ZP2Q05996 745 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 RNASE12Q5GAN4 147 aaKnown RBP10.51□□□□□ -0.73
CLK4-206ENST00000520878 HIST3H2AQ7L7L0 130 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 ACBD7Q8N6N7 88 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 OR6C4Q8NGE1 309 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 OR4C3Q8NH37 302 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 C16orf52Q8NHV5 167 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 HIST1H2ACQ93077 130 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 TSLPQ969D9 159 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 TRIM2Q9C040 744 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 CUTCQ9NTM9 273 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 FAIMQ9NVQ4 179 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 SERTAD3Q9UJW9 196 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 CBLCQ9ULV8 474 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 FUOMA2VDF0 154 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 METTL15A6NJ78 407 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 BCAT2O15382 392 aaPredicted RBP10.51□□□□□ -0.73
CLK4-206ENST00000520878 SCO2O43819 266 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 AK1P00568 194 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 SCG5P05408 212 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 FOSL2P15408 326 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 FPR3P25089 353 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 PYCR1P32322 319 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 GRK6P43250 576 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 NR0B1P51843 470 aaKnown RBP10.51□□□□□ -0.73
CLK4-206ENST00000520878 RHAGQ02094 409 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 BIKQ13323 160 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 SSX1Q16384 188 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 PRAMEF8Q5VWM4 474 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 PRAMEF7Q5VXH5 474 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 OR5M10Q6IEU7 315 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 SDR16C5Q8N3Y7 309 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 NANOGP1Q8N7R0 232 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 NLGN4YQ8NFZ3 816 aaPredicted RBP10.51□□□□□ -0.73
CLK4-206ENST00000520878 PIGKQ92643 395 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 ANKRD9Q96BM1 317 aaPredicted RBP10.51□□□□□ -0.73
CLK4-206ENST00000520878 ZNF559Q9BR84 538 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 DTX4Q9Y2E6 619 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 EXOSC1Q9Y3B2 195 aaKnown RBP10.51□□□□□ -0.73
CLK4-206ENST00000520878 PMF1-BGLAPU3KQ54 211 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 ZNF106Q9H2Y7 1883 aaKnown RBP10.51□□□□□ -0.73
CLK4-206ENST00000520878 CDHR4A6H8M9 788 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 CBX7O95931 251 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 ATP1B1P05026 303 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 GLULP15104 373 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 MAGEA8P43361 318 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 OMPP47874 163 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 ARFIP1P53367 373 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 RAB40BQ12829 278 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 OCLNQ16625 522 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 TCTE1Q5JU00 501 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 IDNKQ5T6J7 187 aa10.51□□□□□ -0.73
CLK4-206ENST00000520878 ZNF620Q6ZNG0 422 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms