RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ASMTP46597 345 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 KCNJ1P48048 391 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 CLK3P49761 638 aaKnown RBP4.32□□□□□ -1.72
SDCBP-207ENST00000520168 FABP6P51161 128 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 CHN2P52757 468 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 ARFIP2P53365 341 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 PNLIPRP2P54317 469 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 DVL1P1P54792 670 aaPredicted RBP4.32□□□□□ -1.72
SDCBP-207ENST00000520168 CDKN2DP55273 166 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 IRF9Q00978 393 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 LGALS3BPQ08380 585 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 ILF2Q12905 390 aaKnown RBP4.32□□□□□ -1.72
SDCBP-207ENST00000520168 ITGADQ13349 1161 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 SNX1Q13596 522 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 MORF4L2Q15014 288 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 RNPS1Q15287 305 aaKnown RBP4.32□□□□□ -1.72
SDCBP-207ENST00000520168 RCN1Q15293 331 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 UAP1Q16222 522 aaPredicted RBP4.32□□□□□ -1.72
SDCBP-207ENST00000520168 PDK4Q16654 411 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 HSP90AA5PQ58FG0 334 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 AWAT1Q58HT5 328 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 TMEM201Q5SNT2 666 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 TIMM23BQ5SRD1 257 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 CEP85LQ5SZL2 805 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 INTS11Q5TA45 600 aaKnown RBP4.32□□□□□ -1.72
SDCBP-207ENST00000520168 KHDRBS2Q5VWX1 349 aaKnown RBP4.32□□□□□ -1.72
SDCBP-207ENST00000520168 C18orf63Q68DL7 685 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 MED27Q6P2C8 311 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 KLHL17Q6TDP4 642 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 CYP20A1Q6UW02 462 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 Q6ZSR9 355 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 Q6ZT83 130 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 GSTA5Q7RTV2 222 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 UBE3DQ7Z6J8 389 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 PEG10Q86TG7 708 aaKnown RBP4.32□□□□□ -1.72
SDCBP-207ENST00000520168 CNTN4Q8IWV2 1026 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 LAS2Q8IYD9 372 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 FADS6Q8N9I5 356 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 MCUQ8NE86 351 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 NUP43Q8NFH3 380 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 OR4K14Q8NGD5 310 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 RNF138Q8WVD3 245 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 MRPL24Q96A35 216 aaKnown RBP4.32□□□□□ -1.72
SDCBP-207ENST00000520168 ARL8AQ96BM9 186 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 ANAPC16Q96DE5 110 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 REXO5Q96IC2 774 aaKnown RBP4.32□□□□□ -1.72
SDCBP-207ENST00000520168 TRMOQ9BU70 441 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 ZBTB26Q9HCK0 441 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 IARS2Q9NSE4 1012 aaKnown RBP4.32□□□□□ -1.72
SDCBP-207ENST00000520168 FBXO34Q9NWN3 711 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 UBAP1Q9NZ09 502 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 ZNF490Q9ULM2 529 aaPredicted RBP4.32□□□□□ -1.72
SDCBP-207ENST00000520168 ABCG2Q9UNQ0 655 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 VWA7Q9Y334 891 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 ZNF337Q9Y3M9 751 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 TSC22D4Q9Y3Q8 395 aa4.32□□□□□ -1.72
SDCBP-207ENST00000520168 RYR3Q15413 4870 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 A0A087WZY1 265 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 IGHV4-61A0A0C4DH41 118 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 PLPP1O14494 284 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 EIF3HO15372 352 aaKnown RBP eCLIP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 RIPK2O43353 540 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 AKAP10O43572 662 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 RAMP1O60894 148 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 STK16O75716 305 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 INMTO95050 263 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 ATP1B1P05026 303 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 TACSTD2P09758 323 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 CT62P0C5K7 136 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 FAM58BPP0C7Q3 252 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 ZSCAN5DPP0CG00 497 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 HSD3B1P14060 373 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 CPMP14384 443 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 PORP16435 677 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 BTF3P20290 206 aaKnown RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 NT5EP21589 574 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 ME2P23368 584 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 PTX3P26022 381 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 EVI2BP34910 448 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 GAS1P54826 345 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 CLDN20P56880 219 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 IRF8Q02556 426 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 MAP4K2Q12851 820 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 CHIT1Q13231 466 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 PIN1Q13526 163 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 MPP2Q14168 576 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 SLC29A2Q14542 456 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 ACAP2Q15057 778 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 TGFBIQ15582 683 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 KRT71Q3SY84 523 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 TTMPQ5BVD1 217 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 RBM20Q5T481 1227 aaKnown RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 SULT1C3Q6IMI6 304 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 MRM1Q6IN84 353 aaKnown RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 PLBD1Q6P4A8 553 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 SHQ1Q6PI26 577 aaKnown RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 SLC22A25Q6T423 547 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 TFAP2EQ6VUC0 442 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 C1orf122Q6ZSJ8 110 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms