RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 SNAPC1Q16533 368 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 PGGHGQ32M88 737 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 FAM214AQ32MH5 1076 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ITPRIPL2Q3MIP1 535 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 EIPR1Q53HC9 387 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZNF628Q5EBL2 1059 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZNF311Q5JNZ3 666 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 AGAP6Q5VW22 663 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 NXNL2Q5VZ03 156 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 TYW3Q6IPR3 259 aaKnown RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 FAM180BQ6P0A1 224 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 XKRXQ6PP77 449 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 CCBE1Q6UXH8 406 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZNF620Q6ZNG0 422 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 REC114Q7Z4M0 266 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 KRT77Q7Z794 578 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ASPGQ86U10 573 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 AMIGO1Q86WK6 493 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 UBQLNLQ8IYU4 475 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 SLC34A3Q8N130 599 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 LRRC25Q8N386 305 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZNF655Q8N720 491 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 ARIH2OSQ8N7S6 290 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 C12orf76Q8N812 135 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 OR8D4Q8NGM9 314 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 OR8K5Q8NH50 307 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 VANGL1Q8TAA9 524 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 TEX47Q8TBZ9 253 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 TM9SF4Q92544 642 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 AP3S1Q92572 193 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 RFKQ969G6 155 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 RNFT2Q96EX2 444 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 SLC35A4Q96G79 324 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZC3HAV1LQ96H79 300 aaKnown RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 RHOVQ96L33 236 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 LRR1Q96L50 414 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 RIPOR3Q96MK2 946 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 AGAP4Q96P64 663 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 SLC38A2Q96QD8 506 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 NELL2Q99435 816 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 STACQ99469 402 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 TRAF4Q9BUZ4 470 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 PLA2G12AQ9BZM1 189 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 PLA2G2FQ9BZM2 168 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZNF350Q9GZX5 532 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 HOXD1Q9GZZ0 328 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 MIXL1Q9H2W2 232 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 XKR8Q9H6D3 395 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 MTHFD2LQ9H903 347 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 SYNPO2LQ9H987 977 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 IL21RQ9HBE5 538 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ABCB10Q9NRK6 738 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 INPP5EQ9NRR6 644 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 DUSP22Q9NRW4 184 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 SEMA4GQ9NTN9 838 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 IMP3Q9NV31 184 aaKnown RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 TXNL4BQ9NX01 149 aaKnown RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 KLHL28Q9NXS3 571 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 SPHK1Q9NYA1 384 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 TVP23BQ9NYZ1 205 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 TRPC4Q9UBN4 977 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 PLEKHB1Q9UF11 243 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZNF229Q9UJW7 825 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZNF223Q9UK11 482 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 PILRAQ9UKJ1 303 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 FBXL21Q9UKT6 434 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 C19orf53Q9UNZ5 99 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 POLHQ9Y253 713 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 KCNK6Q9Y257 313 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZNF443Q9Y2A4 671 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 CMAHPQ9Y471 501 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 OR1A2Q9Y585 309 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 KCNE3Q9Y6H6 103 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 CDH10Q9Y6N8 788 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 LINC00854A0A1B0GVQ3 168 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 A0A1W2PQF6 199 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 ANTXRLA6NF34 631 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 URADA6NGE7 173 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 ANKRD61A6NGH8 418 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 NUDT19A8MXV4 375 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 AP3D1O14617 1153 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 SLC30A4O14863 429 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 SHOXO15266 292 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 CHST10O43529 356 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 PLOD3O60568 738 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 ERAL1O75616 437 aaKnown RBP4.68□□□□□ -1.66
SDC2-204ENST00000519914 PAK4O96013 591 aaPredicted RBP4.68□□□□□ -1.66
SDC2-204ENST00000519914 ATP1B1P05026 303 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 KRT8P05787 483 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 ASGR2P07307 311 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 HSMCR30P0CW71 290 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 SPNP16150 400 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 MYL12AP19105 171 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 ZNF10P21506 573 aaPredicted RBP4.68□□□□□ -1.66
SDC2-204ENST00000519914 GTF2E2P29084 291 aaKnown RBP4.68□□□□□ -1.66
SDC2-204ENST00000519914 NTSR1P30989 418 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 SOX3P41225 446 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 MC3RP41968 323 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 SLC1A3P43003 542 aa4.68□□□□□ -1.66
SDC2-204ENST00000519914 HTR3AP46098 478 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms