RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 KITP10721 976 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 EPXP11678 715 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 HPGDP15428 266 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 UQCRC2P22695 453 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 EPHA3P29320 983 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 CASP9P55211 416 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 RPS26P62854 115 aaKnown RBP8.4□□□□□ -1.06
HDAC3-215ENST00000519474 RAC1P63000 192 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 OCRLQ01968 901 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 TESK1Q15569 626 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 TOMM34Q15785 309 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-215ENST00000519474 CTU2Q2VPK5 515 aaKnown RBP8.4□□□□□ -1.06
HDAC3-215ENST00000519474 PLPPR5Q32ZL2 321 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 ARHGAP11BQ3KRB8 267 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 SPDYE7PQ495Y7 208 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 SPANXN4Q5MJ08 99 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.4□□□□□ -1.06
HDAC3-215ENST00000519474 ANXA8L1Q5VT79 327 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 HEPHL1Q6MZM0 1159 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 P4HA3Q7Z4N8 544 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 SPATA19Q7Z5L4 167 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 LUZP2Q86TE4 346 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 ANKRD46Q86W74 232 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 KIF18BQ86Y91 864 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 MISPQ8IVT2 679 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 GTPBP8Q8N3Z3 284 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-215ENST00000519474 METTL25Q8N6Q8 603 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 B4GALNT2Q8NHY0 566 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 GPR119Q8TDV5 335 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 FAM222BQ8WU58 562 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 XAGE5Q8WWM1 108 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 NRGNQ92686 78 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 ZG16BQ96DA0 208 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 LRRC46Q96FV0 321 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 SH3YL1Q96HL8 342 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-215ENST00000519474 ADGRG7Q96K78 797 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 SFXN3Q9BWM7 321 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 RBM24Q9BX46 236 aaKnown RBP8.4□□□□□ -1.06
HDAC3-215ENST00000519474 PINK1Q9BXM7 581 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 LIME1Q9H400 295 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 HHATLQ9HCP6 504 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 NEUROD4Q9HD90 331 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 RASSF1Q9NS23 344 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 MED17Q9NVC6 651 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 AIG1Q9NVV5 245 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 ICAM5Q9UMF0 924 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 CARD8Q9Y2G2 431 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 DTNAQ9Y4J8 743 aa8.4□□□□□ -1.06
HDAC3-215ENST00000519474 GOLGA8QA0A0J9YX86 632 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 PRAMEF27A3QJZ7 478 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 C7orf72A4D263 438 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 GOLGA8OA6NCC3 632 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 TUBAL3A6NHL2 446 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 SLC22A20A6NK97 555 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 EEF1E1-BLOC1S5C9J1V9 151 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 GOLGA8NF8WBI6 632 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 GTPBP1O00178 669 aaKnown RBP8.39□□□□□ -1.07
HDAC3-215ENST00000519474 MSTNO14793 375 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 ADAMDEC1O15204 470 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 SEC14L5O43304 696 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 EEF1E1O43324 174 aaKnown RBP8.39□□□□□ -1.07
HDAC3-215ENST00000519474 STAMBPO95630 424 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 IL11P20809 199 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 ATP6V1C1P21283 382 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 S100A3P33764 101 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 SLC6A8P48029 635 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 RNF144AP50876 292 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-215ENST00000519474 P2RX1P51575 399 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 NME5P56597 212 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 RPS3AP61247 264 aaKnown RBP8.39□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF117Q03924 483 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 FAM27E3Q08E93 113 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 PON3Q15166 354 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 GUSBP1Q15486 140 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 GPR68Q15743 365 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF141Q15928 474 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 SGCBQ16585 318 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 NDUFAF6Q330K2 333 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 FLYWCH1Q4VC44 716 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 SLC9B1Q4ZJI4 515 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 AGBL2Q5U5Z8 902 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 SAXO2Q658L1 398 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 ATG16L1Q676U5 607 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 VWA1Q6PCB0 445 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 BHLHB9Q6PI77 547 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF474Q6S9Z5 364 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF610Q8N9Z0 462 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 OR4A15Q8NGL6 344 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 FNDC9Q8TBE3 224 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 SMPDL3BQ92485 455 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 OSTF1Q92882 214 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 RAB8BQ92930 207 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 ZBTB8AQ96BR9 441 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 MAELQ96JY0 434 aaKnown RBP8.39□□□□□ -1.07
HDAC3-215ENST00000519474 RNF145Q96MT1 663 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 GPATCH1Q9BRR8 931 aaKnown RBP8.39□□□□□ -1.07
HDAC3-215ENST00000519474 INPP5KQ9BT40 448 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 SAP130Q9H0E3 1048 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 OR51I1Q9H343 314 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 ACBD3Q9H3P7 528 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms