RNA–Protein interactions for RNA: ENST00000519414.5

CHMP7-204, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 914 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-204ENST00000519414 DSCAMO60469 2012 aa17.23■□□□□ 0.35
CHMP7-204ENST00000519414 GXYLT2A0PJZ3 443 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 ADAMDEC1O15204 470 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 SYNGR4O95473 234 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 IGKV1D-16P01601 117 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 DDX5P17844 614 aaKnown RBP17.22■□□□□ 0.35
CHMP7-204ENST00000519414 RPL3P39023 403 aaKnown RBP17.22■□□□□ 0.35
CHMP7-204ENST00000519414 TNK1Q13470 666 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 PTGR1Q14914 329 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 CTU2Q2VPK5 515 aaKnown RBP17.22■□□□□ 0.35
CHMP7-204ENST00000519414 NXNQ6DKJ4 435 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 SPATA19Q7Z5L4 167 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 GTPBP8Q8N3Z3 284 aaPredicted RBP17.22■□□□□ 0.35
CHMP7-204ENST00000519414 CLHC1Q8NHS4 586 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 STON2Q8WXE9 905 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 MTERF3Q96E29 417 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 REEP4Q9H6H4 257 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 BAIAP2L1Q9UHR4 511 aa17.22■□□□□ 0.35
CHMP7-204ENST00000519414 C7orf72A4D263 438 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 ALG1L2C9J202 215 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 POLR3GO15318 223 aaPredicted RBP17.21■□□□□ 0.35
CHMP7-204ENST00000519414 CXCL13O43927 109 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 TBX19O60806 448 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 SOX30O94993 753 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 VIMP08670 466 aaKnown RBP17.21■□□□□ 0.35
CHMP7-204ENST00000519414 G6PDP11413 515 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 PSMB1P20618 241 aaKnown RBP17.21■□□□□ 0.35
CHMP7-204ENST00000519414 AQP5P55064 265 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 RAC1P63000 192 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 PDE7AQ13946 482 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 VPS26BQ4G0F5 336 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 CPTPQ5TA50 214 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 R3HCC1LQ7Z5L2 792 aaKnown RBP17.21■□□□□ 0.35
CHMP7-204ENST00000519414 OR2V1Q8NHB1 315 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 CEP70Q8NHQ1 597 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 GPR151Q8TDV0 419 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 PIK3R3Q92569 461 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 AKAP1Q92667 903 aaKnown RBP eCLIP17.21■□□□□ 0.35
CHMP7-204ENST00000519414 ZBTB8AQ96BR9 441 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 TCF7L2Q9NQB0 619 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 FGFR1OP2Q9NVK5 253 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 LAMP3Q9UQV4 416 aa17.21■□□□□ 0.35
CHMP7-204ENST00000519414 SCAMP2O15127 329 aaKnown RBP17.2■□□□□ 0.34
CHMP7-204ENST00000519414 AKAP10O43572 662 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 NDUFB5O43674 189 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 NGFRP08138 427 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 ALDOCP09972 364 aaKnown RBP17.2■□□□□ 0.34
CHMP7-204ENST00000519414 TROVE2P10155 538 aaKnown RBP eCLIP17.2■□□□□ 0.34
CHMP7-204ENST00000519414 PRPS1L1P21108 318 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 PSMA4P25789 261 aaKnown RBP17.2■□□□□ 0.34
CHMP7-204ENST00000519414 C21orf58P58505 322 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 RPS4XP62701 263 aaKnown RBP17.2■□□□□ 0.34
CHMP7-204ENST00000519414 KRTAP1-1Q07627 177 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 PDSS1Q5T2R2 415 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 GTF2IRD2BQ6EKJ0 949 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 ADAM5Q6NVV9 412 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 ESPNLQ6ZVH7 1005 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 GALNT10Q86SR1 603 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 GTF2IRD2Q86UP8 949 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 OR4C3Q8NH37 302 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 SLC9A6Q92581 669 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 HOXB13Q92826 284 aaPredicted RBP17.2■□□□□ 0.34
CHMP7-204ENST00000519414 PPCDCQ96CD2 204 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 OR52B2Q96RD2 323 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 REPIN1Q9BWE0 567 aaKnown RBP17.2■□□□□ 0.34
CHMP7-204ENST00000519414 NPHS2Q9NP85 383 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 EQTNQ9NQ60 294 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 AIG1Q9NVV5 245 aa17.2■□□□□ 0.34
CHMP7-204ENST00000519414 A0A1W2PRB8 838 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 TNFSF11O14788 317 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 NKX2-2O95096 273 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 OXSR1O95747 527 aaPredicted RBP17.19■□□□□ 0.34
CHMP7-204ENST00000519414 OPN1LWP04000 364 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 NID1P14543 1247 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 MAP3K8P41279 467 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 IDH3AP50213 366 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 ZNF41P51814 821 aaPredicted RBP17.19■□□□□ 0.34
CHMP7-204ENST00000519414 CLDN8P56748 225 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 ETFDHQ16134 617 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 CLEC12BQ2HXU8 276 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 LSM12Q3MHD2 195 aaKnown RBP17.19■□□□□ 0.34
CHMP7-204ENST00000519414 HEPHL1Q6MZM0 1159 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 ZNF551Q7Z340 670 aaPredicted RBP17.19■□□□□ 0.34
CHMP7-204ENST00000519414 STEAP2Q8NFT2 490 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 NPAS1Q99742 590 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 TACO1Q9BSH4 297 aaKnown RBP17.19■□□□□ 0.34
CHMP7-204ENST00000519414 CCDC28BQ9BUN5 200 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 HDHD5Q9BXW7 423 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 MED17Q9NVC6 651 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 ATP6V1HQ9UI12 483 aa17.19■□□□□ 0.34
CHMP7-204ENST00000519414 FBN1P35555 2871 aaKnown RBP17.18■□□□□ 0.34
CHMP7-204ENST00000519414 A0A0J9YW62 118 aa17.18■□□□□ 0.34
CHMP7-204ENST00000519414 PDPK1O15530 556 aa17.18■□□□□ 0.34
CHMP7-204ENST00000519414 PABPC4LP0CB38 370 aaKnown RBP17.18■□□□□ 0.34
CHMP7-204ENST00000519414 IDO1P14902 403 aa17.18■□□□□ 0.34
CHMP7-204ENST00000519414 ME2P23368 584 aa17.18■□□□□ 0.34
CHMP7-204ENST00000519414 AGTR1P30556 359 aa17.18■□□□□ 0.34
CHMP7-204ENST00000519414 DMTNQ08495 405 aa17.18■□□□□ 0.34
CHMP7-204ENST00000519414 HSPB3Q12988 150 aa17.18■□□□□ 0.34
CHMP7-204ENST00000519414 PLPPR5Q32ZL2 321 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms