RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	ZNF117	Q03924	483 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	TIMM23B	Q5SRD1	257 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	ANKRD26P1	Q6NSI1	321 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	ZCCHC12	Q6PEW1	402 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	TIFAB	Q6ZNK6	161 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	MTERF4	Q7Z6M4	381 aa	Known RBP	13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	PHOSPHO1	Q8TCT1	267 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	ZFP90	Q8TF47	636 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	CACNG6	Q9BXT2	260 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	COQ10B	Q9H8M1	238 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	GRPEL1	Q9HAV7	217 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	KLHL9	Q9P2J3	617 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	PRSS50	Q9UI38	385 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	GPC6	Q9Y625	555 aa	Predicted RBP	13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	EXOC1L	A0A1B0GW35	172 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	RGS14	O43566	566 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	SEC22B	O75396	215 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	CRCP	O75575	148 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	SLC25A16	P16260	332 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	P2RX1	P51575	399 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	ELOA3B	Q3SY89	546 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	CCNJ	Q5T5M9	372 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	P2RY8	Q86VZ1	359 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	CCNYL1	Q8N7R7	359 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	ATP6V1C2	Q8NEY4	427 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	ELOA3	Q8NG57	546 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	OR2W6P	Q8NHA6	318 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	JADE3	Q92613	823 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	C16orf58	Q96GQ5	468 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	ZNF764	Q96H86	408 aa	Predicted RBP	13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	METTL2A	Q96IZ6	378 aa	Known RBP	13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	FMO2	Q99518	471 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	PSD2	Q9BQI7	771 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	SHARPIN	Q9H0F6	387 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	CXorf36	Q9H7Y0	433 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	CBLN4	Q9NTU7	201 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	NPAP1	Q9NZP6	1156 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	ACTL7B	Q9Y614	415 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	ALPK2	Q86TB3	2170 aa		13.93	□□□□□ -0.18
LMNA-223	ENST00000515459	IGHV3-15	A0A0B4J1V0	119 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	GOLGA8Q	A0A0J9YX86	632 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	GOLGA8O	A6NCC3	632 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	GOLGA8N	F8WBI6	632 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459		H3BQF6	201 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	GOLGA8R	I6L899	631 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	HAX1	O00165	279 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	GGT1	P19440	569 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	SLC7A1	P30825	629 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	TTK	P33981	857 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	THBS2	P35442	1172 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	FRK	P42685	505 aa	Predicted RBP	13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	RAC3	P60763	192 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	POU6F2	P78424	691 aa	Predicted RBP	13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	KIAA0040	Q15053	153 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	RAB35	Q15286	201 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	CYB5R2	Q6BCY4	276 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	C11orf71	Q6IPW1	123 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	CBLN3	Q6UW01	205 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459		Q6ZSR9	355 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	ZNF527	Q8NB42	609 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	PPCDC	Q96CD2	204 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	OTUB1	Q96FW1	271 aa	Predicted RBP	13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	DHRS9	Q9BPW9	319 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	BTBD2	Q9BX70	525 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	REEP4	Q9H6H4	257 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	ING1	Q9UK53	422 aa	Predicted RBP	13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	ICAM5	Q9UMF0	924 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459	MGAT4B	Q9UQ53	548 aa		13.92	□□□□□ -0.18
LMNA-223	ENST00000515459		E7EQL1	145 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	TBX19	O60806	448 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	PGM3	O95394	542 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	GSTA1	P08263	222 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	PRKCA	P17252	672 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	COX5A	P20674	150 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	ATP6V1C1	P21283	382 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	IGHV1-2	P23083	117 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	PRPH2	P23942	346 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	SUMO3	P55854	103 aa	Predicted RBP	13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	NAA20	P61599	178 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	CKAP4	Q07065	602 aa	Known RBP	13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	RASGEF1B	Q0VAM2	473 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	SELENBP1	Q13228	472 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	TOMM34	Q15785	309 aa	Predicted RBP	13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	ZNF385B	Q569K4	471 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	ARL13A	Q5H913	290 aa	Predicted RBP	13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	EXOSC6	Q5RKV6	272 aa	Known RBP	13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	TMEM108	Q6UXF1	575 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	LRIG3	Q6UXM1	1119 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	SYT10	Q6XYQ8	523 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	MUC15	Q8N387	334 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	ZNF525	Q8N782	197 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	FAM168A	Q92567	244 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	HTRA1	Q92743	480 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	CCDC126	Q96EE4	140 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	CHMP6	Q96FZ7	201 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	MRGPRX4	Q96LA9	322 aa		13.91	□□□□□ -0.18
LMNA-223	ENST00000515459	STAC	Q99469	402 aa		13.91	□□□□□ -0.18

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