RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 CHDHQ8NE62 594 aaPredicted RBP10.33□□□□□ -0.76
VCAN-212ENST00000515397 OR10D3Q8NH80 312 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 GPR119Q8TDV5 335 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 DYDC1Q8WWB3 177 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 ROBO4Q8WZ75 1007 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 ROPN1LQ96C74 230 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 STARD4Q96DR4 205 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 DTNBP1Q96EV8 351 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 DNAJA3Q96EY1 480 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 AURKBQ96GD4 344 aaPredicted RBP10.33□□□□□ -0.76
VCAN-212ENST00000515397 UCN2Q96RP3 112 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 RBM24Q9BX46 236 aaKnown RBP10.33□□□□□ -0.76
VCAN-212ENST00000515397 PRRG4Q9BZD6 226 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 HOXD1Q9GZZ0 328 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 OPN3Q9H1Y3 402 aaPredicted RBP10.33□□□□□ -0.76
VCAN-212ENST00000515397 EXD2Q9NVH0 621 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 BTNL2Q9UIR0 455 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 ICAM5Q9UMF0 924 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 AP4B1Q9Y6B7 739 aa10.33□□□□□ -0.76
VCAN-212ENST00000515397 TEP1Q99973 2627 aaKnown RBP10.33□□□□□ -0.76
VCAN-212ENST00000515397 A0A087WZY1 265 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 RFXANKO14593 260 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 H6PDO95479 791 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 NTN1O95631 604 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 RYKP34925 604 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 KIR2DL2P43627 348 aaPredicted RBP10.32□□□□□ -0.76
VCAN-212ENST00000515397 CPA2P48052 419 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 P2RX1P51575 399 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 POLR2JP52435 117 aaKnown RBP10.32□□□□□ -0.76
VCAN-212ENST00000515397 AQP5P55064 265 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 RAC1P63000 192 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 PPP2R2AP63151 447 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 FAM27E3Q08E93 113 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 DPY19L1Q2PZI1 675 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 CTU2Q2VPK5 515 aaKnown RBP10.32□□□□□ -0.76
VCAN-212ENST00000515397 TMEM176BQ3YBM2 270 aaPredicted RBP10.32□□□□□ -0.76
VCAN-212ENST00000515397 TIGD2Q4W5G0 525 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 ATAD3BQ5T9A4 648 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 TYW3Q6IPR3 259 aaKnown RBP10.32□□□□□ -0.76
VCAN-212ENST00000515397 HEPHL1Q6MZM0 1159 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 FRRS1Q6ZNA5 592 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 MISPQ8IVT2 679 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 LILRA2Q8N149 483 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 GOLGA6L1Q8N7Z2 621 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 GOT1L1Q8NHS2 421 aaPredicted RBP10.32□□□□□ -0.76
VCAN-212ENST00000515397 MIPOL1Q8TD10 442 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 OSTF1Q92882 214 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 C14orf79Q96F83 325 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 C7orf26Q96N11 449 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 GPATCH1Q9BRR8 931 aaKnown RBP10.32□□□□□ -0.76
VCAN-212ENST00000515397 THUMPD3Q9BV44 507 aaKnown RBP10.32□□□□□ -0.76
VCAN-212ENST00000515397 SFXN3Q9BWM7 321 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 ZNF350Q9GZX5 532 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 LIME1Q9H400 295 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 INTS9Q9NV88 658 aaKnown RBP10.32□□□□□ -0.76
VCAN-212ENST00000515397 GALNT8Q9NY28 637 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 JKAMPQ9P055 326 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 WDR45Q9Y484 360 aa10.32□□□□□ -0.76
VCAN-212ENST00000515397 A8MXE2 369 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 ZNF264O43296 627 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 IL18BPO95998 194 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 CSTAP01040 98 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 CHRM4P08173 479 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 UBL4AP11441 157 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 ETFAP13804 333 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 PRKCAP17252 672 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 KLK2P20151 261 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 CPOXP36551 454 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 KHKP50053 298 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 CARD18P57730 90 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 EEFSECP57772 596 aaKnown RBP10.31□□□□□ -0.76
VCAN-212ENST00000515397 RPS3AP61247 264 aaKnown RBP10.31□□□□□ -0.76
VCAN-212ENST00000515397 QPRTQ15274 297 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 ZNF141Q15928 474 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 GSTA3Q16772 222 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 EXOC3L2Q2M3D2 409 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 HBMQ6B0K9 141 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 SLC2A7Q6PXP3 512 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 ZNF474Q6S9Z5 364 aaPredicted RBP10.31□□□□□ -0.76
VCAN-212ENST00000515397 MTERF4Q7Z6M4 381 aaKnown RBP10.31□□□□□ -0.76
VCAN-212ENST00000515397 MIER2Q8N344 545 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 METTL25Q8N6Q8 603 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 ZNF610Q8N9Z0 462 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 GLB1L3Q8NCI6 653 aaPredicted RBP10.31□□□□□ -0.76
VCAN-212ENST00000515397 OR5W2Q8NH69 310 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 OR2V1Q8NHB1 315 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 ZBTB8AQ96BR9 441 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 ADGRG7Q96K78 797 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 NMUR2Q9GZQ4 415 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 TCF7L2Q9NQB0 619 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 SDR39U1Q9NRG7 319 aaPredicted RBP10.31□□□□□ -0.76
VCAN-212ENST00000515397 ARGLU1Q9NWB6 273 aaPredicted RBP10.31□□□□□ -0.76
VCAN-212ENST00000515397 ZIM2Q9NZV7 527 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 KCNN3Q9UGI6 736 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 HEATR5AQ86XA9 2040 aa10.31□□□□□ -0.76
VCAN-212ENST00000515397 IGHV3-15A0A0B4J1V0 119 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 A0A1W2PNR3 127 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 TUBAL3A6NHL2 446 aa10.3□□□□□ -0.76
VCAN-212ENST00000515397 HMGB1P1B2RPK0 211 aaPredicted RBP10.3□□□□□ -0.76
VCAN-212ENST00000515397 LINC01387J3KSC0 135 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms