RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 MARK4Q96L34 752 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 WFIKKN1Q96NZ8 548 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 SDF2Q99470 211 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 TMUB1Q9BVT8 246 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 PRRG4Q9BZD6 226 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 DPY30Q9C005 99 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 ZNF350Q9GZX5 532 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 KCNK9Q9NPC2 374 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 PLSCR4Q9NRQ2 329 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 GLRX2Q9NS18 164 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 PNPOQ9NVS9 261 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 KLHL28Q9NXS3 571 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 KCNE5Q9UJ90 142 aa9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 GPC6Q9Y625 555 aaPredicted RBP9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 MAP1AP78559 2803 aaPredicted RBP9.36□□□□□ -0.91
HMGXB3-205ENST00000514469 ITPR3Q14573 2671 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 CENPVL1A0A0U1RR11 272 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 PRSS51A0A1B0GVH4 220 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 DUXAA6NLW8 204 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 ESPNB1AK53 854 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 E9PBE3 544 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 C16orf97H3BN30 126 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 SDHDO14521 159 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 CASKO14936 926 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 ZNF264O43296 627 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 EFNA2O43921 213 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 KIAA0513O60268 411 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 EIF4E2O60573 245 aaKnown RBP9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 DNAJA2O60884 412 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 STX11O75558 287 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 UGT2B17O75795 530 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 NUDT14O95848 222 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 PLGP00747 810 aaPredicted RBP9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 GUSBP08236 651 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 ALDOCP09972 364 aaKnown RBP9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 PRKCAP17252 672 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 LBPP18428 481 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 UQCRC2P22695 453 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 AGTR1P30556 359 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 SFTPDP35247 375 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 KCNJ5P48544 419 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 CTBP2P56545 445 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 FUT5Q11128 374 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 KEAP1Q14145 624 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 CASP8Q14790 479 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 TOMM34Q15785 309 aaPredicted RBP9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 ZNF141Q15928 474 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 DEFB113Q30KQ7 82 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 ARHGAP11BQ3KRB8 267 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 SLC25A53Q5H9E4 307 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 SPANXN4Q5MJ08 99 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 SAXO2Q658L1 398 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 HEPHL1Q6MZM0 1159 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 ANKRD46Q86W74 232 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 TMCO5AQ8N6Q1 288 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 ZNF614Q8N883 585 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 TOR1AIP2Q8NFQ8 470 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 OR5W2Q8NH69 310 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 FBXO27Q8NI29 283 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 OIT3Q8WWZ8 545 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 CPNE4Q96A23 557 aaPredicted RBP9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 ZBTB9Q96C00 473 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 ZNF524Q96C55 264 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 ARSGQ96EG1 525 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 NEURL3Q96EH8 262 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 MRGPRX4Q96LA9 322 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 CCDC115Q96NT0 180 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 MED18Q9BUE0 208 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 SRXN1Q9BYN0 137 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 OR51I1Q9H343 314 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 COQ10BQ9H8M1 238 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 ZNF226Q9NYT6 803 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 C6orf203Q9P0P8 240 aaPredicted RBP9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 CLEC4AQ9UMR7 237 aa9.35□□□□□ -0.91
HMGXB3-205ENST00000514469 MED12LQ86YW9 2145 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 TMEM120BA0PK00 339 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 SERINC4A6NH21 518 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 GJE1A6NN92 205 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 GTPBP1O00178 669 aaKnown RBP9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 ZNF195O14628 629 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 FCMRO60667 390 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 SNNO75324 88 aaPredicted RBP9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 AGR2O95994 175 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 CD53P19397 219 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 LOXP28300 417 aaPredicted RBP9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 KHKP50053 298 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 SLC18A1P54219 525 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 WDR4P57081 412 aaKnown RBP9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 SELENBP1Q13228 472 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 CBFBQ13951 182 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 QPRTQ15274 297 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 GPR68Q15743 365 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 FAM174BQ3ZCQ3 159 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 HHATQ5VTY9 493 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 AP1ARQ63HQ0 302 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 C22orf34Q6ZV56 151 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 OLIG3Q7RTU3 272 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 ZNF550Q7Z398 422 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 C16orf62Q7Z3J2 963 aa9.34□□□□□ -0.91
HMGXB3-205ENST00000514469 ANKRD42Q8N9B4 389 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms