RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 TMEM237Q96Q45 408 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 L2HGDHQ9H9P8 463 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 BCO1Q9HAY6 547 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 HHATLQ9HCP6 504 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 GOLGA8QA0A0J9YX86 632 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 A0A1W2PNR3 127 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 GOLGA8OA6NCC3 632 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 OR5H1A6NKK0 313 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 GOLGA8NF8WBI6 632 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 H7C417 338 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 GOLGA8RI6L899 631 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 SCDO00767 359 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 KIAA0513O60268 411 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 RAD51DO75771 328 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 PGM3O95394 542 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 NUDT14O95848 222 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 EFNA4P52798 201 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 ZNF117Q03924 483 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 RASGEF1BQ0VAM2 473 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 TOMM34Q15785 309 aaPredicted RBP17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 VPS26BQ4G0F5 336 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 ANKRD26P1Q6NSI1 321 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 CBLN3Q6UW01 205 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 SZRD1Q7Z422 152 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 SLC43A2Q8N370 569 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 SLC16A11Q8NCK7 471 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 ZFP90Q8TF47 636 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 HOXB13Q92826 284 aaPredicted RBP17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 PRR14Q9BWN1 585 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 C1QTNF6Q9BXI9 259 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 ACSS3Q9H6R3 686 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 MYNNQ9NPC7 610 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 UBQLN4Q9NRR5 601 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 SIRT5Q9NXA8 310 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 KLHL9Q9P2J3 617 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 PLCE1Q9P212 2302 aa17.9■□□□□ 0.46
SQSTM1-215ENST00000514093 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 GJE1A6NN92 205 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 IGHV3-9P01782 118 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 DHRS4L1P0CG22 281 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 HNF1AP20823 631 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 CD40P25942 277 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 ELK4P28324 431 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 DUSP5Q16690 384 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 P2RY8Q86VZ1 359 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 MISPQ8IVT2 679 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 ZNF100Q8IYN0 542 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 ZNF433Q8N7K0 673 aaPredicted RBP17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 CDRT4Q8N9R6 151 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 NUP43Q8NFH3 380 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 PHOSPHO1Q8TCT1 267 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 CIDECQ96AQ7 238 aaPredicted RBP17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 ZNF524Q96C55 264 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 GIMAP5Q96F15 307 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 C16orf58Q96GQ5 468 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 MGAT4BQ9UQ53 548 aa17.89■□□□□ 0.45
SQSTM1-215ENST00000514093 ESYT3A0FGR9 886 aa17.88■□□□□ 0.45
SQSTM1-215ENST00000514093 M0R1B8 84 aa17.88■□□□□ 0.45
SQSTM1-215ENST00000514093 RGS14O43566 566 aa17.88■□□□□ 0.45
SQSTM1-215ENST00000514093 INHBAP08476 426 aa17.88■□□□□ 0.45
SQSTM1-215ENST00000514093 COX5AP20674 150 aa17.88■□□□□ 0.45
SQSTM1-215ENST00000514093 SQLEQ14534 574 aa17.88■□□□□ 0.45
SQSTM1-215ENST00000514093 OR6Y1Q8NGX8 325 aa17.88■□□□□ 0.45
SQSTM1-215ENST00000514093 ZNF75CPQ92670 426 aaPredicted RBP17.88■□□□□ 0.45
SQSTM1-215ENST00000514093 EGLN2Q96KS0 407 aa17.88■□□□□ 0.45
SQSTM1-215ENST00000514093 KCNF1Q9H3M0 494 aa17.88■□□□□ 0.45
SQSTM1-215ENST00000514093 NINJ2Q9NZG7 142 aa17.88■□□□□ 0.45
SQSTM1-215ENST00000514093 CARD8Q9Y2G2 431 aa17.88■□□□□ 0.45
SQSTM1-215ENST00000514093 NPIPA5A0A0B4J1W7 369 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 VWC2LB2RUY7 222 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 NPIPA7E9PJI5 369 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 SMAD9O15198 467 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 SPRY1O43609 319 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 TGFAP01135 160 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 CSF3P09919 207 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 NPIPA8P0DM63 369 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 APEHP13798 732 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 PTAFRP25105 342 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 SLC7A1P30825 629 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 PHBP35232 272 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 FOXA1P55317 472 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 RAC3P60763 192 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 NDUFAF6Q330K2 333 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 ARL13AQ5H913 290 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 KLHL17Q6TDP4 642 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 DEPDC4Q8N2C3 294 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 UBE2J2Q8N2K1 259 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 CEP70Q8NHQ1 597 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 INPP5KQ9BT40 448 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 RAB17Q9H0T7 212 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 C12orf65Q9H3J6 166 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 GIN1Q9NXP7 522 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 SLC25A15Q9Y619 301 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 ATP23Q9Y6H3 246 aa17.87■□□□□ 0.45
SQSTM1-215ENST00000514093 IGHV4-61A0A0C4DH41 118 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 A0A1W2PQD3 144 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 CIB4A0PJX0 185 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 TRIM49D1C9J1S8 452 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 PDPK1O15530 556 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 CYTIPO60759 359 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms