RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 LINGO3P0C6S8 592 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 PABPC4LP0CB38 370 aaKnown RBP7.91□□□□□ -1.14
SH3D19-209ENST00000514013 NPIPA8P0DM63 369 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 PTAFRP25105 342 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 SSTR1P30872 391 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 ARFIP2P53365 341 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 CDH15P55291 814 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 PSPHP78330 225 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 SLC18A2Q05940 514 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 FOXF1Q12946 379 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 PDIA2Q13087 525 aaKnown RBP7.91□□□□□ -1.14
SH3D19-209ENST00000514013 MORF4L2Q15014 288 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 ACAP2Q15057 778 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 TRIP10Q15642 601 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 CD226Q15762 336 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 DECR1Q16698 335 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 CPTPQ5TA50 214 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 GTF2IRD2BQ6EKJ0 949 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 PEG10Q86TG7 708 aaKnown RBP7.91□□□□□ -1.14
SH3D19-209ENST00000514013 TBC1D1Q86TI0 1168 aaPredicted RBP7.91□□□□□ -1.14
SH3D19-209ENST00000514013 GTF2IRD2Q86UP8 949 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 PLD6Q8N2A8 252 aaKnown RBP7.91□□□□□ -1.14
SH3D19-209ENST00000514013 OR4C3Q8NH37 302 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 FAM110BQ8TC76 370 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 ZBTB8AQ96BR9 441 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 LRRC39Q96DD0 335 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 SH3YL1Q96HL8 342 aaPredicted RBP7.91□□□□□ -1.14
SH3D19-209ENST00000514013 SNX18Q96RF0 628 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 KRTAP4-9Q9BYQ8 210 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 BCO1Q9HAY6 547 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 GP6Q9HCN6 339 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 AHSPQ9NZD4 102 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 PSME2Q9UL46 239 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 MGAT4BQ9UQ53 548 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 ATP23Q9Y6H3 246 aa7.91□□□□□ -1.14
SH3D19-209ENST00000514013 ALG1L2C9J202 215 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 E7ESA3 106 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 GUCY1B2O75343 617 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 PRKD3O94806 890 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 PDYNP01213 254 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 GHRHP01286 108 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 TACSTD2P09758 323 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 GFAPP14136 432 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 CHN1P15882 459 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 APEX1P27695 318 aaKnown RBP7.9□□□□□ -1.14
SH3D19-209ENST00000514013 NTF4P34130 210 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 PRIM2P49643 509 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 ALDH18A1P54886 795 aaKnown RBP7.9□□□□□ -1.14
SH3D19-209ENST00000514013 HILS1P60008 231 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 RAE1P78406 368 aaKnown RBP7.9□□□□□ -1.14
SH3D19-209ENST00000514013 CHRNB3Q05901 458 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 CCNIQ14094 377 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 TRADDQ15628 312 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 PDCD2Q16342 344 aaPredicted RBP7.9□□□□□ -1.14
SH3D19-209ENST00000514013 TCHHL1Q5QJ38 904 aaPredicted RBP7.9□□□□□ -1.14
SH3D19-209ENST00000514013 TMEM107Q6UX40 140 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 RPS27LQ71UM5 84 aaKnown RBP7.9□□□□□ -1.14
SH3D19-209ENST00000514013 TRABD2AQ86V40 505 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 LINC01356Q8N9X3 169 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 GRK7Q8WTQ7 553 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 PIK3R3Q92569 461 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 CPNE4Q96A23 557 aaPredicted RBP7.9□□□□□ -1.14
SH3D19-209ENST00000514013 LMF2Q9BU23 707 aaKnown RBP7.9□□□□□ -1.14
SH3D19-209ENST00000514013 TRMOQ9BU70 441 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 FAIM2Q9BWQ8 316 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 C7orf69Q9H7B7 122 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 NMRAL1Q9HBL8 299 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 SLC35C2Q9NQQ7 365 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 NSMCE4AQ9NXX6 385 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 TAS2R9Q9NYW1 312 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 C19orf53Q9UNZ5 99 aaPredicted RBP7.9□□□□□ -1.14
SH3D19-209ENST00000514013 FKBP7Q9Y680 259 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 PMF1-BGLAPU3KQ54 211 aa7.9□□□□□ -1.14
SH3D19-209ENST00000514013 TCRBV9S1A1TA0A576 114 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 PGRMC1O00264 195 aaKnown RBP7.89□□□□□ -1.15
SH3D19-209ENST00000514013 UPK1AO00322 258 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 RGS14O43566 566 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 STAMBPO95630 424 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 ESRRBO95718 433 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 OXSR1O95747 527 aaPredicted RBP7.89□□□□□ -1.15
SH3D19-209ENST00000514013 JUNP05412 331 aaKnown RBP7.89□□□□□ -1.15
SH3D19-209ENST00000514013 ME2P23368 584 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 GIFP27352 417 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 APOBEC3AP31941 199 aaPredicted RBP7.89□□□□□ -1.15
SH3D19-209ENST00000514013 GP5P40197 560 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 ARL1P40616 181 aaPredicted RBP7.89□□□□□ -1.15
SH3D19-209ENST00000514013 DVL1P1P54792 670 aaPredicted RBP7.89□□□□□ -1.15
SH3D19-209ENST00000514013 ARL4CP56559 192 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 PHC1P78364 1004 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 TOMM34Q15785 309 aaPredicted RBP7.89□□□□□ -1.15
SH3D19-209ENST00000514013 TMEM176BQ3YBM2 270 aaPredicted RBP7.89□□□□□ -1.15
SH3D19-209ENST00000514013 PDSS1Q5T2R2 415 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 LETMD1Q6P1Q0 360 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 RAPH1Q70E73 1250 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 P2RY8Q86VZ1 359 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 ZBED8Q8IZ13 594 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 FAM9CQ8IZT9 166 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 SVOPLQ8N434 492 aa7.89□□□□□ -1.15
SH3D19-209ENST00000514013 PTGR2Q8N8N7 351 aaPredicted RBP7.89□□□□□ -1.15
SH3D19-209ENST00000514013 CDYL2Q8N8U2 506 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms