RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 GPC6Q9Y625 555 aaPredicted RBP11.21□□□□□ -0.61
VEGFA-216ENST00000512683 V9GYY5 206 aaPredicted RBP11.21□□□□□ -0.61
VEGFA-216ENST00000512683 TNFSF11O14788 317 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 TLX2O43763 284 aaPredicted RBP11.2□□□□□ -0.62
VEGFA-216ENST00000512683 SLU7O95391 586 aaKnown RBP11.2□□□□□ -0.62
VEGFA-216ENST00000512683 BPGMP07738 259 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 CD3EP07766 207 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 YES1P07947 543 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 KRT16P08779 473 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 EFNA1P20827 205 aaPredicted RBP11.2□□□□□ -0.62
VEGFA-216ENST00000512683 CAPRIN1Q14444 709 aaKnown RBP11.2□□□□□ -0.62
VEGFA-216ENST00000512683 NCMAPQ5T1S8 102 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 PPP4R4Q6NUP7 873 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 CXXC5Q7LFL8 322 aaKnown RBP11.2□□□□□ -0.62
VEGFA-216ENST00000512683 P2RY8Q86VZ1 359 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 MREGQ8N565 214 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 COX18Q8N8Q8 333 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 SLC16A11Q8NCK7 471 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 POC1BQ8TC44 478 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 RNF128Q8TEB7 428 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 FBXW5Q969U6 566 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 RADILQ96JH8 1075 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 BARX1Q9HBU1 254 aaPredicted RBP11.2□□□□□ -0.62
VEGFA-216ENST00000512683 SIRT3Q9NTG7 399 aaPredicted RBP11.2□□□□□ -0.62
VEGFA-216ENST00000512683 FBXO34Q9NWN3 711 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 ATP6V1HQ9UI12 483 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 CLEC4AQ9UMR7 237 aa11.2□□□□□ -0.62
VEGFA-216ENST00000512683 TMEM114B3SHH9 223 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 SHISA8B8ZZ34 492 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 ZNF195O14628 629 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 PEX11AO75192 247 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 GCM2O75603 506 aaPredicted RBP11.19□□□□□ -0.62
VEGFA-216ENST00000512683 PLAUP00749 431 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 IFNA2P01563 188 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 DANCRP0C864 163 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 ACP2P11117 423 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 ATP6V1C1P21283 382 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 IL32P24001 234 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 SERPINB5P36952 375 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 P2RX1P51575 399 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 RAC3P60763 192 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 POU6F2P78424 691 aaPredicted RBP11.19□□□□□ -0.62
VEGFA-216ENST00000512683 ZNF844Q08AG5 666 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 ITGADQ13349 1161 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 TNK1Q13470 666 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 ZNF239Q16600 458 aaKnown RBP11.19□□□□□ -0.62
VEGFA-216ENST00000512683 DUSP5Q16690 384 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 CLEC12BQ2HXU8 276 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 KLHL26Q53HC5 615 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 C6orf136Q5SQH8 315 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 FIGNL1Q6PIW4 674 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 ZAR1Q86SH2 424 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 OR7A2PQ8NGA2 310 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 PSMA8Q8TAA3 256 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 SMAP2Q8WU79 429 aaPredicted RBP11.19□□□□□ -0.62
VEGFA-216ENST00000512683 KISS1RQ969F8 398 aaPredicted RBP11.19□□□□□ -0.62
VEGFA-216ENST00000512683 S100PBPQ96BU1 408 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 MRGPRX4Q96LA9 322 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 PPP3R2Q96LZ3 170 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 PARD6BQ9BYG5 372 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 BCO1Q9HAY6 547 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 KLHL13Q9P2N7 655 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 LAMP3Q9UQV4 416 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 STAB1Q9NY15 2570 aa11.19□□□□□ -0.62
VEGFA-216ENST00000512683 HEATR5AQ86XA9 2040 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 ETV2O00321 342 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-216ENST00000512683 SCAMP2O15127 329 aaKnown RBP11.18□□□□□ -0.62
VEGFA-216ENST00000512683 ZNF500O60304 480 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-216ENST00000512683 EIF4E2O60573 245 aaKnown RBP11.18□□□□□ -0.62
VEGFA-216ENST00000512683 LYPLA1O75608 230 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-216ENST00000512683 TP53P04637 393 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-216ENST00000512683 THBS1P07996 1170 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 LAMP1P11279 417 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 FKBP2P26885 142 aaKnown RBP11.18□□□□□ -0.62
VEGFA-216ENST00000512683 MAPK1P28482 360 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 ATP12AP54707 1039 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 DMTNQ08495 405 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 PTGR1Q14914 329 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 LSM12Q3MHD2 195 aaKnown RBP11.18□□□□□ -0.62
VEGFA-216ENST00000512683 ZNF672Q499Z4 452 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-216ENST00000512683 SLC25A53Q5H9E4 307 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 C1QTNF12Q5T7M4 302 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 CDC73Q6P1J9 531 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 PODNL1Q6PEZ8 512 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 BHLHB9Q6PI77 547 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 TFAP2EQ6VUC0 442 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 Q6ZT83 130 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 FCRLAQ7L513 359 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 RIMKLAQ8IXN7 391 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 TOR1AIP2Q8NFQ8 470 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 LILRB1Q8NHL6 650 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-216ENST00000512683 FBXO30Q8TB52 745 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 PIWIL2Q8TC59 973 aaKnown RBP11.18□□□□□ -0.62
VEGFA-216ENST00000512683 OIT3Q8WWZ8 545 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 OR5P2Q8WZ92 322 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 MOAP1Q96BY2 351 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 C16orf58Q96GQ5 468 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 PRPF18Q99633 342 aaKnown RBP11.18□□□□□ -0.62
VEGFA-216ENST00000512683 C1orf50Q9BV19 199 aa11.18□□□□□ -0.62
VEGFA-216ENST00000512683 POTEKPQ9BYX7 375 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms