RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 HOXD1Q9GZZ0 328 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 QRSL1Q9H0R6 528 aaKnown RBP11.94□□□□□ -0.5
RNF4-215ENST00000511843 OPN3Q9H1Y3 402 aaPredicted RBP11.94□□□□□ -0.5
RNF4-215ENST00000511843 BTNL2Q9UIR0 455 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 CLEC4AQ9UMR7 237 aa11.94□□□□□ -0.5
RNF4-215ENST00000511843 C7orf72A4D263 438 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 SERINC4A6NH21 518 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 DUXAA6NLW8 204 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 H3BNH8 94 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 ZNF264O43296 627 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 SLC22A3O75751 556 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 UGT2B17O75795 530 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 UBL4AP11441 157 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 IDO1P14902 403 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 H2AFXP16104 143 aaPredicted RBP11.93□□□□□ -0.5
RNF4-215ENST00000511843 KIR2DL2P43627 348 aaPredicted RBP11.93□□□□□ -0.5
RNF4-215ENST00000511843 KHKP50053 298 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 EEFSECP57772 596 aaKnown RBP11.93□□□□□ -0.5
RNF4-215ENST00000511843 ZNF141Q15928 474 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 GTDC1Q4AE62 458 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 PDCD4Q53EL6 469 aaKnown RBP11.93□□□□□ -0.5
RNF4-215ENST00000511843 TYW3Q6IPR3 259 aaKnown RBP11.93□□□□□ -0.5
RNF4-215ENST00000511843 BTLAQ7Z6A9 289 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 GPR119Q8TDV5 335 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 LRRC8CQ8TDW0 803 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 ZG16BQ96DA0 208 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 STARD4Q96DR4 205 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 LRRC46Q96FV0 321 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 ADGRG7Q96K78 797 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 NMUR2Q9GZQ4 415 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 ACBD3Q9H3P7 528 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 RNF122Q9H9V4 155 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 EXD2Q9NVH0 621 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 PACSIN3Q9UKS6 424 aa11.93□□□□□ -0.5
RNF4-215ENST00000511843 ANKHD1Q8IWZ3 2542 aaKnown RBP11.93□□□□□ -0.5
RNF4-215ENST00000511843 CELSR1Q9NYQ6 3014 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 CLDN24A6NM45 220 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 HMGN4O00479 90 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 UBDO15205 165 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 KIAA0513O60268 411 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 CTAG2O75638 210 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 SOX30O94993 753 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 AK1P00568 194 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 UBTFL6P0CB48 400 aaPredicted RBP11.92□□□□□ -0.5
RNF4-215ENST00000511843 PRKCAP17252 672 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 RPS3AP61247 264 aaKnown RBP11.92□□□□□ -0.5
RNF4-215ENST00000511843 RAC1P63000 192 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 SKP2Q13309 424 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 QPRTQ15274 297 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 SYPL1Q16563 259 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 TIGD2Q4W5G0 525 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 GPAT3Q53EU6 434 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 ATAD3BQ5T9A4 648 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 HBMQ6B0K9 141 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 OR2A2Q6IF42 318 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 EPGNQ6UW88 154 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 FRRS1Q6ZNA5 592 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 HDXQ7Z353 690 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 CDH24Q86UP0 819 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 LILRA2Q8N149 483 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 ANKFN1Q8N957 763 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 OR5W2Q8NH69 310 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 VPS33AQ96AX1 596 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 C7orf26Q96N11 449 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 EBF4Q9BQW3 602 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 PRRG4Q9BZD6 226 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 HHATLQ9HCP6 504 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 SDR39U1Q9NRG7 319 aaPredicted RBP11.92□□□□□ -0.5
RNF4-215ENST00000511843 DNAJB12Q9NXW2 375 aaKnown RBP11.92□□□□□ -0.5
RNF4-215ENST00000511843 ZNF175Q9Y473 711 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 WDR45Q9Y484 360 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 AKAP9Q99996 3911 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 FREM1Q5H8C1 2179 aa11.92□□□□□ -0.5
RNF4-215ENST00000511843 AKAP6Q13023 2319 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 TUBAL3A6NHL2 446 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 A8MXE2 369 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 RFXANKO14593 260 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 SASH3O75995 380 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 H6PDO95479 791 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 CSTAP01040 98 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 CHRM4P08173 479 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 ME2P23368 584 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 IDH3AP50213 366 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 SUMO3P55854 103 aaPredicted RBP11.91□□□□□ -0.5
RNF4-215ENST00000511843 PLAURQ03405 335 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 CHRNEQ04844 493 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 FAM27E3Q08E93 113 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 GSTA3Q16772 222 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 KIF18BQ86Y91 864 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 TOR1AIP2Q8NFQ8 470 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 OR2V1Q8NHB1 315 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 DYDC1Q8WWB3 177 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 ROBO4Q8WZ75 1007 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 OSTF1Q92882 214 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 THOC1Q96FV9 657 aaKnown RBP11.91□□□□□ -0.5
RNF4-215ENST00000511843 AURKBQ96GD4 344 aaPredicted RBP11.91□□□□□ -0.5
RNF4-215ENST00000511843 KLHL15Q96M94 604 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 THUMPD3Q9BV44 507 aaKnown RBP11.91□□□□□ -0.5
RNF4-215ENST00000511843 POLDIP3Q9BY77 421 aaKnown RBP11.91□□□□□ -0.5
RNF4-215ENST00000511843 SRXN1Q9BYN0 137 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms