RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 LBPP18428 481 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 PTGER1P34995 402 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 CENPAP49450 140 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 SRP9P49458 86 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 CDKN1CP49918 316 aaPredicted RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 MYBPC1Q00872 1141 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 PMP22Q01453 160 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 CLCQ05315 142 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 MED21Q13503 144 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 GGTLC2Q14390 218 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 PON3Q15166 354 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 GRAMD1BQ3KR37 738 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 TMEM176BQ3YBM2 270 aaPredicted RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 C4orf48Q5BLP8 95 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 C6orf10Q5SRN2 563 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 IL23RQ5VWK5 629 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 ZC3HC1Q86WB0 502 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 LAS2Q8IYD9 372 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 C1orf52Q8N6N3 182 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 Q8NA96 180 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 OR52R1Q8NGF1 315 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 OR2AJ1Q8NGZ0 328 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 HUS1BQ8NHY5 278 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 WDR20Q8TBZ3 569 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 FAM110BQ8TC76 370 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 ZFP90Q8TF47 636 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 AKAP1Q92667 903 aaKnown RBP eCLIP2.58□□□□□ -2
CLOCK-209ENST00000511124 RDH5Q92781 318 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 SLCO2A1Q92959 643 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 TM4SF19Q96DZ7 209 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 WDR34Q96EX3 536 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 EGLN2Q96KS0 407 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 MTERF1Q99551 399 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 PAIP2Q9BPZ3 127 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 PLK3Q9H4B4 646 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 MTHFD2LQ9H903 347 aaPredicted RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 FOLH1BQ9HBA9 442 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 PNPLA3Q9NST1 481 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 TRMT1Q9NXH9 659 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 CIDEBQ9UHD4 219 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 TMEFF2Q9UIK5 374 aaPredicted RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 LAMP3Q9UQV4 416 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 NBASA2RRP1 2371 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 SCN8AQ9UQD0 1980 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 A0A1B0GTL3 188 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 NKX2-6A6NCS4 301 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 ANTXRLA6NF34 631 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 H3BSA7 217 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 MANBAO00462 879 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 SMAD9O15198 467 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 POLR3GO15318 223 aaPredicted RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 SIAH2O43255 324 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 PPIHO43447 177 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 NDUFA2O43678 99 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 XPNPEP2O43895 674 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 CXCL13O43927 109 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 FZD7O75084 574 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 UTS2O95399 124 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 CPSF4O95639 269 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 TGFAP01135 160 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 FGF4P08620 206 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 ABHD2P08910 425 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 KRT4P19013 534 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 UQCRC2P22695 453 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 APEX1P27695 318 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 POU1F1P28069 291 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 MPGP29372 298 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 GGT5P36269 586 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 GNALP38405 381 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 DAP3P51398 398 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 SLC37A1P57057 533 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 ARF1P84077 181 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 ID2Q02363 134 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 LGALS3BPQ08380 585 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 SCRN3Q0VDG4 424 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 SRSF6Q13247 344 aaKnown RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 MAPK14Q16539 360 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 PGS1Q32NB8 556 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 MROH9Q5TGP6 573 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 RGS7BPQ6MZT1 257 aaPredicted RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 SLC48A1Q6P1K1 146 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 PLBD1Q6P4A8 553 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 ERICH5Q6P6B1 374 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 KCTD18Q6PI47 426 aaPredicted RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 C3P1Q6ZMU1 363 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 Q6ZTK2 550 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 CNTN4Q8IWV2 1026 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 MUC15Q8N387 334 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 OR5W2Q8NH69 310 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 SLC25A28Q96A46 364 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 FAM71F1Q96KD3 344 aaPredicted RBP2.58□□□□□ -2
CLOCK-209ENST00000511124 RNF145Q96MT1 663 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 GAL3ST1Q99999 423 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 SYT11Q9BT88 431 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 ADI1Q9BV57 179 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 LAT2Q9GZY6 243 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 PIGUQ9H490 435 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 OPA3Q9H6K4 179 aa2.58□□□□□ -2
CLOCK-209ENST00000511124 ZNF703Q9H7S9 590 aaPredicted RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms