RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ADH6P28332 368 aa14.1□□□□□ -0.15
RAB40C-202ENST00000509637 ARRB2P32121 409 aa14.1□□□□□ -0.15
RAB40C-202ENST00000509637 BSPH1Q075Z2 132 aa14.1□□□□□ -0.15
RAB40C-202ENST00000509637 LASP1Q14847 261 aaKnown RBP14.1□□□□□ -0.15
RAB40C-202ENST00000509637 DNAJC14Q6Y2X3 702 aaPredicted RBP14.1□□□□□ -0.15
RAB40C-202ENST00000509637 SZRD1Q7Z422 152 aa14.1□□□□□ -0.15
RAB40C-202ENST00000509637 C10orf107Q8IVU9 208 aa14.1□□□□□ -0.15
RAB40C-202ENST00000509637 ATP6V1C2Q8NEY4 427 aa14.1□□□□□ -0.15
RAB40C-202ENST00000509637 STEAP2Q8NFT2 490 aa14.1□□□□□ -0.15
RAB40C-202ENST00000509637 PHOSPHO1Q8TCT1 267 aa14.1□□□□□ -0.15
RAB40C-202ENST00000509637 ZNF300Q96RE9 604 aaPredicted RBP14.1□□□□□ -0.15
RAB40C-202ENST00000509637 TRAF4Q9BUZ4 470 aaPredicted RBP14.1□□□□□ -0.15
RAB40C-202ENST00000509637 REPIN1Q9BWE0 567 aaKnown RBP14.1□□□□□ -0.15
RAB40C-202ENST00000509637 BTBD2Q9BX70 525 aa14.1□□□□□ -0.15
RAB40C-202ENST00000509637 PAQR5Q9NXK6 330 aaPredicted RBP14.1□□□□□ -0.15
RAB40C-202ENST00000509637 PSMC3IPQ9P2W1 217 aaPredicted RBP14.1□□□□□ -0.15
RAB40C-202ENST00000509637 SLC28A1O00337 649 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 TMCC2O75069 709 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 GLRA3O75311 464 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 H6PDO95479 791 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 CPA3P15088 417 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 ZNF41P51814 821 aaPredicted RBP14.09□□□□□ -0.15
RAB40C-202ENST00000509637 FOXG1P55316 489 aaPredicted RBP14.09□□□□□ -0.15
RAB40C-202ENST00000509637 C21orf58P58505 322 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 RPL38P63173 70 aaKnown RBP14.09□□□□□ -0.15
RAB40C-202ENST00000509637 POU6F2P78424 691 aaPredicted RBP14.09□□□□□ -0.15
RAB40C-202ENST00000509637 PCLAFQ15004 111 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 FCRLAQ7L513 359 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 COX18Q8N8Q8 333 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 FBXW5Q969U6 566 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 ZBED6CLQ96FA7 236 aaPredicted RBP14.09□□□□□ -0.15
RAB40C-202ENST00000509637 METTL2AQ96IZ6 378 aaKnown RBP14.09□□□□□ -0.15
RAB40C-202ENST00000509637 PSD2Q9BQI7 771 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 PIGUQ9H490 435 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 SERHL2Q9H4I8 314 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 GPATCH2Q9NW75 528 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 ATP6V1HQ9UI12 483 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 PLCE1Q9P212 2302 aa14.09□□□□□ -0.15
RAB40C-202ENST00000509637 AZIN1O14977 448 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 SMAD9O15198 467 aaKnown RBP14.08□□□□□ -0.16
RAB40C-202ENST00000509637 CD5LO43866 347 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 BCAS1O75363 584 aaPredicted RBP14.08□□□□□ -0.16
RAB40C-202ENST00000509637 LYZL6O75951 148 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 CD3EP07766 207 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 YES1P07947 543 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 IGHV1-2P23083 117 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 CRHR1P34998 444 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 DMTNQ08495 405 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 VPS26BQ4G0F5 336 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 TMEM201Q5SNT2 666 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 LIPMQ5VYY2 423 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 KANK2Q63ZY3 851 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 HMBOX1Q6NT76 420 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 CDC73Q6P1J9 531 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 STK32CQ86UX6 486 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 HIPK1Q86Z02 1210 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 CCDC126Q96EE4 140 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 C3orf30Q96M34 536 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 HDHD5Q9BXW7 423 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 QRSL1Q9H0R6 528 aaKnown RBP14.08□□□□□ -0.16
RAB40C-202ENST00000509637 BCO1Q9HAY6 547 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 B3GALT5Q9Y2C3 310 aa14.08□□□□□ -0.16
RAB40C-202ENST00000509637 IGHV4-30-2A0A087WSY4 118 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 ETV2O00321 342 aaPredicted RBP14.07□□□□□ -0.16
RAB40C-202ENST00000509637 SCDO00767 359 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 CRCPO75575 148 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 PRKD3O94806 890 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 LCN1P31025 176 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 IDUAP35475 653 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 OR3A2P47893 321 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 P2RX1P51575 399 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 IRX1P78414 480 aaPredicted RBP14.07□□□□□ -0.16
RAB40C-202ENST00000509637 ITGADQ13349 1161 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 MLC1Q15049 377 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 GALNTL6Q49A17 601 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 SLC25A53Q5H9E4 307 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 ZCCHC12Q6PEW1 402 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 RNF165Q6ZSG1 346 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 BHLHA15Q7RTS1 189 aaPredicted RBP14.07□□□□□ -0.16
RAB40C-202ENST00000509637 DTX2Q86UW9 622 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 CLEC4FQ8N1N0 589 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 BANPQ8N9N5 519 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 PSMA8Q8TAA3 256 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 ZFP90Q8TF47 636 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 HSD17B8Q92506 261 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 JADE3Q92613 823 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 HTRA1Q92743 480 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 CPNE4Q96A23 557 aaPredicted RBP14.07□□□□□ -0.16
RAB40C-202ENST00000509637 STACQ99469 402 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 TACO1Q9BSH4 297 aaKnown RBP14.07□□□□□ -0.16
RAB40C-202ENST00000509637 YAE1D1Q9NRH1 226 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 DUSP22Q9NRW4 184 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 ZCCHC3Q9NUD5 404 aaKnown RBP14.07□□□□□ -0.16
RAB40C-202ENST00000509637 STOML1Q9UBI4 398 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 ACTL7BQ9Y614 415 aa14.07□□□□□ -0.16
RAB40C-202ENST00000509637 UQCRHLA0A096LP55 91 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 SCAMP2O15127 329 aaKnown RBP14.06□□□□□ -0.16
RAB40C-202ENST00000509637 RGS14O43566 566 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 DNAJA2O60884 412 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 C6orf47O95873 294 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms