RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 S100A3P33764 101 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 CHI3L1P36222 383 aaPredicted RBP13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 P2RX1P51575 399 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 CLNS1AP54105 237 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 RAC1P63000 192 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 EEF1A1P68104 462 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 DAZAP2Q15038 168 aaPredicted RBP13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 TESK1Q15569 626 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 CTU2Q2VPK5 515 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 BEND6Q5SZJ8 279 aaPredicted RBP13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 ANXA8L1Q5VT79 327 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 EEF1A1P5Q5VTE0 462 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 ZNF474Q6S9Z5 364 aaPredicted RBP13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 KIRREL3Q8IZU9 778 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 ZNF610Q8N9Z0 462 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 VPS37AQ8NEZ2 397 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 OR2V1Q8NHB1 315 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 XAGE5Q8WWM1 108 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 TESCQ96BS2 214 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 ADGRG7Q96K78 797 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 TMBIM4Q9HC24 238 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 AIG1Q9NVV5 245 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 THAP1Q9NVV9 213 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 KLHL28Q9NXS3 571 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 ST6GALNAC2Q9UJ37 374 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 KCNE5Q9UJ90 142 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 MCTS1Q9ULC4 181 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 ICAM5Q9UMF0 924 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 PROCRQ9UNN8 238 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 HIVEP1P15822 2718 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 FAM221AA4D161 298 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 C7orf72A4D263 438 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 DUXAA6NLW8 204 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 NPIPB9F8W1W9 429 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 HDAC3O15379 428 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 EFNA2O43921 213 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 SNNO75324 88 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 POU2F1P14859 743 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 UQCRC2P22695 453 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 IL12AP29459 219 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 CD79BP40259 229 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 CTBP2P56545 445 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 CASP8Q14790 479 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 ARHGAP11BQ3KRB8 267 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 ATG16L1Q676U5 607 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 OGFOD2Q6N063 350 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 ESPNLQ6ZVH7 1005 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 FAM214BQ7L5A3 538 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 ZNF550Q7Z398 422 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 ROBO4Q8WZ75 1007 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 ZNF524Q96C55 264 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 TLCD1Q96CP7 247 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 ZC3HAV1LQ96H79 300 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 KLHL15Q96M94 604 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 SLC35A5Q9BS91 424 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 MANSC1Q9H8J5 431 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 EXD2Q9NVH0 621 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 C6orf203Q9P0P8 240 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 NDRG3Q9UGV2 375 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 EMC9Q9Y3B6 208 aa13.27□□□□□ -0.29
UBE2D3-228ENST00000508974 SERINC4A6NH21 518 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 TRPC5OSA6NMA1 111 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 CASKO14936 926 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 ZNF264O43296 627 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 STX11O75558 287 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 UGT2B17O75795 530 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 SOX30O94993 753 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 CGAP01215 116 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 GSNP06396 782 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 UBTFL6P0CB48 400 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 PRKCAP17252 672 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 CCKARP32238 428 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 CDKN2CP42773 168 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 KHKP50053 298 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 QPRTQ15274 297 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 DPY19L1Q2PZI1 675 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 SLC9B1Q4ZJI4 515 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 GPAT3Q53EU6 434 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 PDSS1Q5T2R2 415 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 ATAD3BQ5T9A4 648 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 SAXO2Q658L1 398 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 ANKRD34AQ69YU3 496 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 DNAJC14Q6Y2X3 702 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 SPATA19Q7Z5L4 167 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 LSRQ86X29 649 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 CHDHQ8NE62 594 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 TOR1AIP2Q8NFQ8 470 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 PNPT1Q8TCS8 783 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 GPR119Q8TDV5 335 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 OSTF1Q92882 214 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 DACH2Q96NX9 599 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 WFIKKN1Q96NZ8 548 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 OR52E6Q96RD3 313 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 PANX1Q96RD7 426 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 INPP5KQ9BT40 448 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 MED18Q9BUE0 208 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 THUMPD3Q9BV44 507 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 SRXN1Q9BYN0 137 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 KLHL4Q9C0H6 718 aa13.26□□□□□ -0.29
UBE2D3-228ENST00000508974 C12orf49Q9H741 205 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms