RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 ENPP6Q6UWR7 440 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 MTERF4Q7Z6M4 381 aaKnown RBP16.37■□□□□ 0.21
CLDND1-220ENST00000508902 RETREG3Q86VR2 466 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 ZNF619Q8N2I2 560 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 PIAS4Q8N2W9 510 aaPredicted RBP16.37■□□□□ 0.21
CLDND1-220ENST00000508902 CA5BP1Q8WTZ4 195 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 ASB5Q8WWX0 329 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 FIG4Q92562 907 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 TMEM120AQ9BXJ8 343 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 HOXD1Q9GZZ0 328 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 CALHM2Q9HA72 323 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 EXD2Q9NVH0 621 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 COQ3Q9NZJ6 369 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 VAPAQ9P0L0 249 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 DSPPQ9NZW4 1301 aa16.37■□□□□ 0.21
CLDND1-220ENST00000508902 A0A096LPI6 279 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 ETV2O00321 342 aaPredicted RBP16.36■□□□□ 0.21
CLDND1-220ENST00000508902 SEC14L5O43304 696 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 UBL4AP11441 157 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 HPGDP15428 266 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 ZNF17P17021 662 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 P2RX1P51575 399 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 AGFG1P52594 562 aaKnown RBP16.36■□□□□ 0.21
CLDND1-220ENST00000508902 DLX5P56178 289 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 C6orf10Q5SRN2 563 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 TRIML2Q8N7C3 387 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 SMPDL3BQ92485 455 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 ZNF317Q96PQ6 595 aaPredicted RBP16.36■□□□□ 0.21
CLDND1-220ENST00000508902 PIGQQ9BRB3 760 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 ENKD1Q9H0I2 346 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 MED4Q9NPJ6 270 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 POLE3Q9NRF9 147 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 CHST2Q9Y4C5 530 aa16.36■□□□□ 0.21
CLDND1-220ENST00000508902 A0A087WZY1 265 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 AGR2O95994 175 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 SNRPB2P08579 225 aaKnown RBP16.35■□□□□ 0.21
CLDND1-220ENST00000508902 PEPDP12955 493 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 NID1P14543 1247 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 PRKCAP17252 672 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 GPAT3Q53EU6 434 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 RPS26P11Q5JNZ5 115 aaPredicted RBP16.35■□□□□ 0.21
CLDND1-220ENST00000508902 ATAD3BQ5T9A4 648 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 DLEU7Q6UYE1 221 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 LRRC74BQ6ZQY2 392 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 ZNF295-AS1Q8N0V1 137 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 METTL25Q8N6Q8 603 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 ZNF527Q8NB42 609 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 TRNT1Q96Q11 434 aaKnown RBP16.35■□□□□ 0.21
CLDND1-220ENST00000508902 TRIM8Q9BZR9 551 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 TMEM185BQ9H7F4 350 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 RMND5AQ9H871 391 aa16.35■□□□□ 0.21
CLDND1-220ENST00000508902 A0A0J9YW62 118 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 ZNF264O43296 627 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 KRT75O95678 551 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 TFPTP0C1Z6 253 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 UBTFL6P0CB48 400 aaPredicted RBP16.34■□□□□ 0.21
CLDND1-220ENST00000508902 BMP2P12643 396 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 NCF2P19878 526 aaPredicted RBP16.34■□□□□ 0.21
CLDND1-220ENST00000508902 SLC6A8P48029 635 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 SUMO3P55854 103 aaPredicted RBP16.34■□□□□ 0.21
CLDND1-220ENST00000508902 SLC25A53Q5H9E4 307 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 GCNT2Q8N0V5 402 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 OR5W2Q8NH69 310 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 FBXO27Q8NI29 283 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 SLC38A5Q8WUX1 472 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 CNOT9Q92600 299 aaKnown RBP16.34■□□□□ 0.21
CLDND1-220ENST00000508902 MAL2Q969L2 176 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 MARVELD3Q96A59 401 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 ZBTB8AQ96BR9 441 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 LAT2Q9GZY6 243 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 AKAP9Q99996 3911 aa16.34■□□□□ 0.21
CLDND1-220ENST00000508902 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 A0A1W2PP18 115 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 AGAP5A6NIR3 686 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 CLIC1O00299 241 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 ATP8B1O43520 1251 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 EIF4E2O60573 245 aaKnown RBP16.33■□□□□ 0.2
CLDND1-220ENST00000508902 TNFSF13O75888 250 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 AQP8O94778 261 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 CSTAP01040 98 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 BCHEP06276 602 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 BMP5P22003 454 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 GCKP35557 465 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 MDH1P40925 334 aaKnown RBP16.33■□□□□ 0.2
CLDND1-220ENST00000508902 ZNF41P51814 821 aaPredicted RBP16.33■□□□□ 0.2
CLDND1-220ENST00000508902 DSTNP60981 165 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 SELPLGQ14242 412 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 QPRTQ15274 297 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 RGNQ15493 299 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 ARFGAP2Q8N6H7 521 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 FNDC9Q8TBE3 224 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 WNT2BQ93097 391 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 TMEM19Q96HH6 336 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 CPPED1Q9BRF8 314 aaPredicted RBP16.33■□□□□ 0.2
CLDND1-220ENST00000508902 SIKE1Q9BRV8 207 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 THUMPD3Q9BV44 507 aaKnown RBP16.33■□□□□ 0.2
CLDND1-220ENST00000508902 PINK1Q9BXM7 581 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 COQ10BQ9H8M1 238 aa16.33■□□□□ 0.2
CLDND1-220ENST00000508902 DNAJB12Q9NXW2 375 aaKnown RBP16.33■□□□□ 0.2
CLDND1-220ENST00000508902 GMEB1Q9Y692 573 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms