RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ZNF117Q03924 483 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 CRYZQ08257 329 aaKnown RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 SKP2Q13309 424 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 SCARB2Q14108 478 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 CAPRIN1Q14444 709 aaKnown RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 CD226Q15762 336 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 GXYLT1Q4G148 440 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 PDSS1Q5T2R2 415 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 RNF220Q5VTB9 566 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 C1QL3Q5VWW1 255 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 VASNQ6EMK4 673 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 NANOGP8Q6NSW7 305 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 ZNF550Q7Z398 422 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 NET1Q7Z628 596 aaPredicted RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 GTPBP8Q8N3Z3 284 aaPredicted RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 MEIOBQ8N635 442 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 FAM71CQ8NEG0 241 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 TNIP2Q8NFZ5 429 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 OR52P1PQ8NH57 321 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 PHF10Q8WUB8 498 aaKnown RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 ST8SIA1Q92185 356 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 MAL2Q969L2 176 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 RCN3Q96D15 328 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 ARSGQ96EG1 525 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 REXO5Q96IC2 774 aaKnown RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 MRGPRX4Q96LA9 322 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 PRDM14Q9GZV8 571 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 NANOGQ9H9S0 305 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 MED17Q9NVC6 651 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 PAQR5Q9NXK6 330 aaPredicted RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 KLHL28Q9NXS3 571 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 ICAM5Q9UMF0 924 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 VDAC3Q9Y277 283 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 CARD8Q9Y2G2 431 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 RPH3AQ9Y2J0 694 aaPredicted RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 LIPGQ9Y5X9 500 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 SPIN1Q9Y657 262 aaPredicted RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 AP4B1Q9Y6B7 739 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 RELNP78509 3460 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 FLNCQ14315 2725 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 HELZ2Q9BYK8 2649 aaKnown RBP8.28□□□□□ -1.08
NUP54-207ENST00000508583 PRAMEF27A3QJZ7 478 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 H0Y3Z8 333 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 FAAHO00519 579 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 ADAM10O14672 748 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 AIM2O14862 343 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 ZIC3O60481 467 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 WISP2O76076 250 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 ZIC2O95409 532 aaPredicted RBP8.28□□□□□ -1.08
NUP54-207ENST00000508583 LINGO3P0C6S8 592 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 PABPC4LP0CB38 370 aaKnown RBP8.28□□□□□ -1.08
NUP54-207ENST00000508583 CPN1P15169 458 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 BMP7P18075 431 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 PRKAR1BP31321 381 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 PCGF2P35227 344 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 PGM1P36871 562 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 HTR3AP46098 478 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 MAP2K6P52564 334 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 GFRA1P56159 465 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 NCALDP61601 193 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 COPZ1P61923 177 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 SELENBP1Q13228 472 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 KRT72Q14CN4 511 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 C3AR1Q16581 482 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 PLPPR5Q32ZL2 321 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 ZNF311Q5JNZ3 666 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 MRPL2Q5T653 305 aaKnown RBP8.28□□□□□ -1.08
NUP54-207ENST00000508583 C1orf185Q5T7R7 199 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 FAM91A1Q658Y4 838 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 ZNF585AQ6P3V2 769 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 B3GNT6Q6ZMB0 384 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 PATL1Q86TB9 770 aaKnown RBP8.28□□□□□ -1.08
NUP54-207ENST00000508583 FJX1Q86VR8 437 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 DOLPP1Q86YN1 238 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 GRAMD2AQ8IUY3 354 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 LACC1Q8IV20 430 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 POU5F2Q8N7G0 328 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 OR10A6Q8NH74 314 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 NFKBIDQ8NI38 313 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 ZNF563Q8TA94 476 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 ZPLD1Q8TCW7 415 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 BCAS4Q8TDM0 211 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 TIMP4Q99727 224 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 UGT2B28Q9BY64 529 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 RTN4RQ9BZR6 473 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 QRSL1Q9H0R6 528 aaKnown RBP8.28□□□□□ -1.08
NUP54-207ENST00000508583 IKZF5Q9H5V7 419 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 RUBCNLQ9H714 662 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 SPAG4Q9NPE6 437 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 TIGARQ9NQ88 270 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 SERINC1Q9NRX5 453 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 COQ3Q9NZJ6 369 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 PLA2G2EQ9NZK7 142 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 SPRR3Q9UBC9 169 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 TAGLN3Q9UI15 199 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 SH3BGRL2Q9UJC5 107 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 TINAGQ9UJW2 476 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 CAMK2AQ9UQM7 478 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 ZNF443Q9Y2A4 671 aaPredicted RBP8.28□□□□□ -1.08
NUP54-207ENST00000508583 MEMO1Q9Y316 297 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms